RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 USP17L7P0C7H9 530 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 OR1E1P30953 314 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 SKIV2L2P42285 1042 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 GPR1P46091 355 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TUBP50607 506 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ATP12AP54707 1039 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 KCNK10P57789 538 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 AGBL2Q5U5Z8 902 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 RIBC1Q8N443 379 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 MMGT1Q8N4V1 131 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 UROC1Q96N76 676 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CEP41Q9BYV8 373 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 SPG21Q9NZD8 308 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF711Q9Y462 761 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 UBR1Q8IWV7 1749 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TRIM49D1C9J1S8 452 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 GZMAP12544 262 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CTNNB1P35222 781 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 HALP42357 657 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 SERPINB8P50452 374 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PREPLQ4J6C6 727 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ADAM32Q8TC27 787 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 THUMPD3Q9BV44 507 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 MANSC1Q9H8J5 431 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ARL2BPQ9Y2Y0 163 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 C3P01024 1663 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CYP51A1Q16850 503 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 C16orf89Q6UX73 402 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ZDHHC17Q8IUH5 632 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 FLCNQ8NFG4 579 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TUBGCP3Q96CW5 907 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 SERPINB11Q96P15 392 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM121Q9BTD3 319 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CARD9Q9H257 536 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PLAGL2Q9UPG8 496 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 E9PBE3 544 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 GRK3P35626 688 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 CPA2P48052 419 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TUFMP49411 452 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 FKBP1BP68106 108 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 COLGALT1Q8NBJ5 622 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 SLC24A3Q9HC58 644 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PIH1D1Q9NWS0 290 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ALKBH4Q9NXW9 302 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 HLA-DQA2P01906 255 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 UMPSP11172 480 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TCEA1P23193 301 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TAF13Q15543 124 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 HLA-DQA1Q5Y7H0 255 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 DNAAF5Q86Y56 855 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 RSPH1Q8WYR4 309 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 E2F7Q96AV8 911 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ATP13A1Q9HD20 1204 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 DRG1Q9Y295 367 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF541Q9H0D2 1346 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ADCY6O43306 1168 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 GLP2RO95838 553 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 GRK2P25098 689 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 MCOLN2Q8IZK6 566 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 HELQQ8TDG4 1101 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 CASKIN2Q8WXE0 1202 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 BTBD9Q96Q07 612 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PRPF18Q99633 342 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ARHGEF3Q9NR81 526 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PCDHB9Q9Y5E1 797 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 RAMP2O60895 175 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 KLHL18O94889 574 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 KRT16P08779 473 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 RAD23BP54727 409 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 C1QBPQ07021 282 aaKnown RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 MTA1Q13330 715 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 SGSM3Q96HU1 749 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 OSBPL1AQ9BXW6 950 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM120BA0PK00 339 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 TPST1O60507 370 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 MSH3P20585 1137 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 DMTNQ08495 405 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PRKAA1Q13131 559 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 NFIL3Q16649 462 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PIK3R5Q8WYR1 880 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms