RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DYNLT1P63172 113 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 CREMQ03060 361 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 SKIDA1Q1XH10 827 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 FOXR1Q6PIV2 292 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 ARFGAP2Q8N6H7 521 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 KCTD6Q8NC69 237 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 CCHCR1Q8TD31 782 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 HSPH1Q92598 858 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 KHSRPQ92945 711 aaKnown RBP eCLIP17.97■□□□□ 0.476e-7■■■□□ 17.2
UBE3D-203ENST00000369747 PGM2Q96G03 612 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 C8orf48Q96LL4 319 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 CYP4F11Q9HBI6 524 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 CYLDQ9NQC7 956 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 DNAJC17Q9NVM6 304 aaKnown RBP17.97■□□□□ 0.47
UBE3D-203ENST00000369747 SAE1Q9UBE0 346 aaPredicted RBP17.97■□□□□ 0.47
UBE3D-203ENST00000369747 SLC12A6Q9UHW9 1150 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 TRIM66O15016 1216 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ADH1AP07327 375 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 IVLP07476 585 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ATF6P18850 670 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ACADSBP45954 432 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 SLC5A3P53794 718 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 SMAD3P84022 425 aaKnown RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 OTUD4Q01804 1114 aaKnown RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 IFRD2Q12894 506 aaPredicted RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 CCDC14Q49A88 953 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 SIX6OS1Q8N1H7 587 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 PLXNA3P51805 1871 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 DPYSL4O14531 572 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 DNALI1O14645 258 aaPredicted RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ENDOD1O94919 500 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 USP17L7P0C7H9 530 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ARSEP51690 589 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 PPP2R2AP63151 447 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 EPS8L3Q8TE67 593 aaKnown RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 CFAP57Q96MR6 1250 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 TMEM121Q9BTD3 319 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 EMILIN2Q9BXX0 1053 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 ULBP1Q9BZM6 244 aa17.96■□□□□ 0.47
UBE3D-203ENST00000369747 COLQQ9Y215 455 aaPredicted RBP17.96■□□□□ 0.47
UBE3D-203ENST00000369747 TLDC2A0PJX2 215 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 PRRG1O14668 218 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 ACSL3O95573 720 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 TTC4O95801 387 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 USP46P62068 366 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 CDO1Q16878 200 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 C6orf118Q5T5N4 469 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 LILRA6Q6PI73 481 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 TTC13Q8NBP0 860 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 GIPC2Q8TF65 315 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 FRMD8P1Q9BZ68 369 aaPredicted RBP17.95■□□□□ 0.46
UBE3D-203ENST00000369747 ATG2AQ2TAZ0 1938 aa17.95■□□□□ 0.46
UBE3D-203ENST00000369747 SPTBN5Q9NRC6 3674 aaKnown RBP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 SMIM23A6NLE4 172 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 PER2O15055 1255 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 LSP1P33241 339 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 TUFMP49411 452 aaKnown RBP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 SNX16P57768 344 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 CROCCP2Q86T23 111 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 RFX6Q8HWS3 928 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 RELL1Q8IUW5 271 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 TCEAL8Q8IYN2 117 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 PCDH9Q9HC56 1237 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 NINJ2Q9NZG7 142 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 USP3Q9Y6I4 520 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 SGK1O00141 431 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 ZBED1O96006 694 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 CLCN4P51793 760 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 MRPS5P82675 430 aaKnown RBP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 ATP11AP98196 1134 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 GPS1Q13098 491 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 MMRN1Q13201 1228 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 KYNUQ16719 465 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 TNFAIP8L3Q5GJ75 292 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 DENND5BQ6ZUT9 1274 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 BHLHA9Q7RTU4 235 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 ADGRD2Q7Z7M1 963 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 RBM23Q86U06 439 aaKnown RBP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 ZDHHC17Q8IUH5 632 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 NUP93Q8N1F7 819 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 ZCCHC9Q8N567 271 aaKnown RBP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 CALN1Q9BXU9 219 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 CNGB3Q9NQW8 809 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.94■□□□□ 0.46
UBE3D-203ENST00000369747 CALCOCO1Q9P1Z2 691 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 HSFX1Q9UBD0 423 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
UBE3D-203ENST00000369747 PRUNE2Q8WUY3 3088 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 YJEFN3A6XGL0 299 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 E7ENQ6 273 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 APOC4-APOC2K7ER74 178 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 RASGRF2O14827 1237 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 RGS16O15492 202 aaPredicted RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 PRPSAP2O60256 369 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 LPXNO60711 386 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 APOC2P02655 101 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms