RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 RAB14P61106 215 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 BFSP2Q13515 415 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 ERMARDQ5T6L9 678 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 RIBC1Q8N443 379 aaPredicted RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 SEC22BO75396 215 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 MAPK1P28482 360 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 COL26A1Q96A83 441 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 POMKQ9H5K3 350 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 SYBUQ9NX95 663 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 ZNF112Q9UJU3 913 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 TP73O15350 636 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 THRAP10827 490 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 BOLA3Q53S33 107 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 DEFB107AQ8IZN7 70 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 BPIFA1Q9NP55 256 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 MID1IP1Q9NPA3 183 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 ZNF484Q5JVG2 852 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 HS6ST1O60243 411 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 USP12O75317 370 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 CYP2C8P10632 490 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 LBPP18428 481 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 HNRNPH1P31943 449 aaKnown RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 SLC44A4Q53GD3 710 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 N4BP2L1Q5TBK1 243 aaPredicted RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 ZNF571Q7Z3V5 609 aaPredicted RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 TSPAN16Q9UKR8 245 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 ADM5C9JUS6 153 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 ZNF57Q68EA5 555 aaPredicted RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 PARP8Q8N3A8 854 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 BUD23O43709 281 aaKnown RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 CLTBP09497 229 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 NEDD8Q15843 81 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 RSBN1Q5VWQ0 802 aaPredicted RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 IZUMO1Q8IYV9 350 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 EFCAB1Q9HAE3 211 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 AVENQ9NQS1 362 aaPredicted RBP18.6■□□□□ 0.57
SNX27-202ENST00000368841 VPS9D1Q9Y2B5 631 aa18.6■□□□□ 0.57
SNX27-202ENST00000368841 H3BN98 237 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 EIF2S1P05198 315 aaKnown RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 CPA3P15088 417 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 MARSP56192 900 aaKnown RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 TBX4P57082 545 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 MPP3Q13368 585 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 CNGA2Q16280 664 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 ZCWPW2Q504Y3 356 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 POU5F2Q8N7G0 328 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 BACE1P56817 501 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 IZUMO2Q6UXV1 221 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 COL23A1Q86Y22 540 aaPredicted RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 MTA3Q9BTC8 594 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 SERHL2Q9H4I8 314 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 SERHLQ9NQF3 203 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 AADACL2Q6P093 401 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 CYP4X1Q8N118 509 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 CCDC154A6NI56 674 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 TBC1D12O60347 775 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 PRKAG1P54619 331 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 CRADDP78560 199 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 PCNX4Q63HM2 1172 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 ADGRA1Q86SQ6 560 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 DPY30Q9C005 99 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 PDE5AO76074 875 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 DDNO94850 711 aaPredicted RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 SKIV2L2P42285 1042 aaKnown RBP18.59■□□□□ 0.57
SNX27-202ENST00000368841 LRRC6Q86X45 466 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 KLHL4Q9C0H6 718 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 VIPAS39Q9H9C1 493 aa18.59■□□□□ 0.57
SNX27-202ENST00000368841 TET3O43151 1660 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 PDK2Q15119 407 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 RSPH1Q8WYR4 309 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 BBS4Q96RK4 519 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 RGS18Q9NS28 235 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 SPG21Q9NZD8 308 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 BDNFP23560 247 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 ANXA11P50995 505 aaKnown RBP18.58■□□□□ 0.57
SNX27-202ENST00000368841 AP5B1Q2VPB7 878 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 MAP1SQ66K74 1059 aaPredicted RBP18.58■□□□□ 0.57
SNX27-202ENST00000368841 ZNF280DQ6N043 979 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 RGL4Q8IZJ4 473 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 UBASH3BQ8TF42 649 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 ATP13A1Q9HD20 1204 aa18.58■□□□□ 0.57
SNX27-202ENST00000368841 ATG7O95352 703 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 CCR1P32246 355 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 BST2Q10589 180 aaKnown RBP18.58■□□□□ 0.56
SNX27-202ENST00000368841 NPNTQ6UXI9 565 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 NEK10Q6ZWH5 1172 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 MROH8Q9H579 483 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 MBD5Q9P267 1494 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 GPR75-ASB3A0A0A6YYF3 556 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 ZNF862O60290 1169 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 TAF13Q15543 124 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms