RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 LENG9Q96B70 501 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 NSL1Q96IY1 281 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 TRIM4Q9C037 500 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.39
PTPRK-203ENST00000368207 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.39
PTPRK-203ENST00000368207 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.39
PTPRK-203ENST00000368207 MMP3P08254 477 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ARHGDIAP52565 204 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 CDH17Q12864 832 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ATP13A1Q9HD20 1204 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 HAO1Q9UJM8 370 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ATRNL1Q5VV63 1379 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 BTNL10A8MVZ5 291 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 M0R2N6 131 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 OPLAHO14841 1288 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 SERPINF2P08697 491 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 NR2C2P49116 596 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 RENBPP51606 427 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ICA1LQ8NDH6 482 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 TCP10LQ8TDR4 215 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
PTPRK-203ENST00000368207 GPAMQ9HCL2 828 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 UTP6Q9NYH9 597 aaKnown RBP12.64□□□□□ -0.39
PTPRK-203ENST00000368207 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 TREHO43280 583 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 VAPBO95292 243 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 TEDDM1Q5T9Z0 273 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 LGI2Q8N0V4 545 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 USP6NLQ92738 828 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 MT-CO1P00395 513 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 APOA4P06727 396 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ABCG1P45844 678 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 BRCC3P46736 316 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 AQP5P55064 265 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 SDHAF4Q5VUM1 108 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 ICE2Q659A1 982 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 KCNK16Q96T55 309 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 FAM105AQ9NUU6 356 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
PTPRK-203ENST00000368207 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-203ENST00000368207 GPR25O00155 361 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 LIASO43766 372 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 CPA3P15088 417 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 CRADDP78560 199 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 LRRC38Q5VT99 294 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ZCCHC9Q8N567 271 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 OSBPL1AQ9BXW6 950 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 NIFKQ9BYG3 293 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 VPS26AO75436 327 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 SOAT2O75908 522 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 SHBGP04278 402 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 DARSP14868 501 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 RPL22P35268 128 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ARL2P36404 184 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 RUBCNLQ9H714 662 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 HOXC6P09630 235 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 RNF157Q96PX1 679 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 ASPSCR1Q9BZE9 553 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 DRG1Q9Y295 367 aaKnown RBP12.63□□□□□ -0.39
PTPRK-203ENST00000368207 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 IPPQ9Y573 584 aa12.63□□□□□ -0.39
PTPRK-203ENST00000368207 B4GALT4O60513 344 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 TRIM16O95361 564 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 PLIN5Q00G26 463 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 NOGQ13253 232 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 TUBGCP3Q96CW5 907 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 MRPL9Q9BYD2 267 aaKnown RBP12.62□□□□□ -0.39
PTPRK-203ENST00000368207 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 WWOXQ9NZC7 414 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 RNF112Q9ULX5 631 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 RGPD2P0DJD1 1756 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 MAP2K7O14733 419 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 GLP2RO95838 553 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
PTPRK-203ENST00000368207 IL10P22301 178 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 MMP8P22894 467 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 ICAM3P32942 547 aa12.62□□□□□ -0.39
PTPRK-203ENST00000368207 GP5P40197 560 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms