RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 KCNA1Q09470 495 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 SNAPC2Q13487 334 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 LBRQ14739 615 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMCO4Q5TGY1 634 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 MRPS26Q9BYN8 205 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ULK2Q8IYT8 1036 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 CDC26Q8NHZ8 85 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 RPL14P50914 215 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 NPY5RQ15761 445 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMEM79Q9BSE2 394 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 hCG_1818297A0A087WSY0 165 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 DEFB129Q9H1M3 183 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 M0QYT0 321 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 WNT7AO00755 349 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 HIST1H2AGP0C0S8 130 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 HIST1H2ADP20671 130 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZNF483Q8TF39 744 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 HIST1H2AHQ96KK5 128 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 HIST1H2AJQ99878 128 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 H2AFJQ9BTM1 129 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 POLG2Q9UHN1 485 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 ETFBP38117 255 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 GRIK1P39086 918 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CD151P48509 253 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 LHX1P48742 406 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 KCNMB4Q86W47 210 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 IFNEQ86WN2 208 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CHSY1Q86X52 802 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 NDFIP2Q9NV92 336 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CD274Q9NZQ7 290 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 GRIN2DO15399 1336 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CAMK1DQ8IU85 385 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 VPS33AQ96AX1 596 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TTLL9Q3SXZ7 439 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAXCQ5TGI0 409 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 WDR60Q8WVS4 1066 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 ASIC4Q96FT7 647 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 NMRK1Q9NWW6 199 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 MRPS15P82914 257 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TAGAPQ8N103 731 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 PRCCQ92733 491 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 MMP8P22894 467 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TTC27Q6P3X3 843 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 DHFR2Q86XF0 187 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TSPAN18Q96SJ8 248 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TSPAN16Q9UKR8 245 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 C2orf81A6NN90 581 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CYP2C18P33260 490 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 RXRGP48443 463 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 CDK5RAP1Q96SZ6 601 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 NMRAL1Q9HBL8 299 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMEM59LQ9UK28 342 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 RASSF9O75901 435 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 PIWIL4Q7Z3Z4 852 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 EIF3LQ9Y262 564 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
CDC42BPA-202ENST00000366764 A0A096LPK6 155 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 C3orf67Q6ZVT6 689 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 KIAA2013Q8IYS2 634 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 SPON2Q9BUD6 331 aa12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.47
CDC42BPA-202ENST00000366764 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 A0A087X1B8 175 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZNF23P17027 643 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 BLMHQ13867 455 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 ACOT1Q86TX2 421 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 UNC93AQ86WB7 457 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 TRMT6Q9UJA5 497 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 VWA5AO00534 786 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 DMC1Q14565 340 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 INSCQ1MX18 579 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZNF410Q86VK4 478 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms