RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 KRTAP11-1Q8IUC1 163 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CKAP2LQ8IYA6 745 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ABRAQ8N0Z2 381 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 C12orf76Q8N812 135 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 SMC1BQ8NDV3 1235 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 FAM46DQ8NEK8 389 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 GABPB2Q8TAK5 448 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 NEK9Q8TD19 979 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 RFT1Q96AA3 541 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 EME1Q96AY2 570 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 P2RY11Q96G91 374 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 GPR101Q96P66 508 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 DHX36Q9H2U1 1008 aaKnown RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 AAMDCQ9H7C9 122 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 UBTD1Q9HAC8 227 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ERVK-5Q9HDB9 667 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 MLXIPLQ9NP71 852 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLAMF7Q9NQ25 335 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TRIM36Q9NQ86 728 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ABCB10Q9NRK6 738 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZDHHC18Q9NUE0 388 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMEM160Q9NX00 188 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 OCIAD1Q9NX40 245 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TBC1D14Q9P2M4 693 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 MAGEC2Q9UBF1 373 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC8A2Q9UPR5 921 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 DLGAP4Q9Y2H0 992 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 SAC3D1A6NKF1 404 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 PYCARD-AS1I3L0S3 204 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 RHODO00212 210 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 DCXO43602 365 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 LIASO43766 372 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 KPNA6O60684 536 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TCEA3O75764 348 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SERPINI2O75830 405 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 RAPGEF3O95398 923 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 IGLV1-44P01699 117 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 WNT1P04628 370 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TUBBP07437 444 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC3A2P08195 630 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 FTH1P19P0C7X4 201 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 DPEP1P16444 411 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TSHRP16473 764 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 RXRAP19793 462 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SMARCA1P28370 1054 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TLX1P31314 330 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 VIPR2P41587 438 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 NEK4P51957 841 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 NUDT6P53370 316 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRKAG1P54619 331 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ADPRHP54922 357 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SESN3P58005 492 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TUBB4BP68371 445 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 RAE1P78406 368 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 KRT17Q04695 432 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TLE1Q04724 770 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 GRSF1Q12849 480 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TARDBPQ13148 414 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 KIF22Q14807 665 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 AMOTQ4VCS5 1084 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TCTEX1D4Q5JR98 221 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TTC39AQ5SRH9 613 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 CERCAMQ5T4B2 595 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 USP49Q70CQ1 688 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 NXPE1Q8N323 547 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 PAQR4Q8N4S7 273 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 OR2W6PQ8NHA6 318 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMEM171Q8WVE6 324 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SORCS1Q8WY21 1168 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 HDAC10Q969S8 669 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 EDC3Q96F86 508 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 FOXN4Q96NZ1 517 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF385AQ96PM9 386 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF300Q96RE9 604 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 CTRCQ99895 268 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 VGLL1Q99990 258 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 MCRIP2Q9BUT9 160 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 CINPQ9BW66 212 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 TTLL2Q9BWV7 592 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 RNF26Q9BY78 433 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 IL25Q9H293 177 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 MAP6D1Q9H9H5 199 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ERVMER34-1Q9H9K5 563 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 USP29Q9HBJ7 922 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SPTLC3Q9NUV7 552 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 IL36RNQ9UBH0 155 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 GABBR1Q9UBS5 961 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 LPAR3Q9UBY5 353 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 UTS2RQ9UKP6 389 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZDHHC8Q9ULC8 765 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 FZD4Q9ULV1 537 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 USP22Q9UPT9 525 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 PCDHGA2Q9Y5H1 932 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 CSAG2Q9Y5P2 127 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 SNX14Q9Y5W7 946 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 CKAP5Q14008 2032 aa0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 ATXN2Q99700 1313 aaKnown RBP0.29□□□□□ -2.36
RNU6-54P-201ENST00000365563 IGHV4OR15-8A0A075B7B6 117 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms