RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PEBP4Q96S96 227 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 LPIN3Q9BQK8 851 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 EURLQ9NYK6 297 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 AP4E1Q9UPM8 1137 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 NHSL1Q5SYE7 1610 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SDR42E2A6NKP2 422 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 KPNA7A9QM74 516 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 RNASEH1O60930 286 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SIN3BO75182 1162 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 VTNP04004 478 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EDN1P05305 212 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 HNRNPCP07910 306 aaKnown RBP eCLIP6.76□□□□□ -1.333e-6■■■□□ 18.5
CSDE1-203ENST00000358528 EPHA3P29320 983 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 RPS6KA3P51812 740 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 BACE1P56817 501 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ACTR3P61158 418 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FOLH1Q04609 750 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM132BQ14DG7 1078 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CTC1Q2NKJ3 1217 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 RBM44Q6ZP01 1051 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ZBTB46Q86UZ6 589 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 LRRC43Q8N309 656 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FLAD1Q8NFF5 587 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EZH1Q92800 747 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ELOVL4Q9GZR5 314 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 IL1RL2Q9HB29 575 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 BFARQ9NZS9 450 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SSX2IPQ9Y2D8 614 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TEX264Q9Y6I9 313 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TRAFD1O14545 582 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MAGEC1O60732 1142 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SUPT3HO75486 399 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CSPG5O95196 566 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TGDSO95455 350 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SERPINE1P05121 402 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PYGLP06737 847 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SRGAP2BP0DMP2 458 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 VCLP18206 1134 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 UBA1P22314 1058 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CASP2P42575 452 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CCNG1P51959 295 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PGGT1BP53609 377 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SLC18A1P54219 525 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SNX16P57768 344 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 OLIG2Q13516 323 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 R3HDM1Q15032 1099 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 IER5Q5VY09 327 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SPATA6LQ8N4H0 392 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PAF1Q8N7H5 531 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TDRD5Q8NAT2 981 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FAM156AQ8NDB6 213 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TFB1MQ8WVM0 346 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 NDRG1Q92597 394 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MPHOSPH6Q99547 160 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EBNA1BP2Q99848 306 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MRPL1Q9BYD6 325 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SNX25Q9H3E2 840 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MMADHCQ9H3L0 296 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EPS15L1Q9UBC2 864 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 BCAP29Q9UHQ4 241 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 A0A087WZ62 844 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SLC15A5A6NIM6 579 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EGFRP00533 1210 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 POLBP06746 335 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 VDRP11473 427 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TFE3P19532 575 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ALDH1A3P47895 512 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SULT1E1P49888 294 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MXD4Q14582 209 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 USP10Q14694 798 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SLC5A9Q2M3M2 681 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MTHFD1LQ6UB35 978 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 MICALL2Q8IY33 904 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 RTKN2Q8IZC4 609 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ARFGAP1Q8N6T3 406 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 COPS5Q92905 334 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ACO2Q99798 780 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FDXACB1Q9BRP7 624 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 WDR83Q9BRX9 315 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FRMD8P1Q9BZ68 369 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 LRRC4Q9HBW1 653 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TCF7L2Q9NQB0 619 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 HOXC10Q9NYD6 342 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM216Q9P0N5 145 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 HACL1Q9UJ83 578 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 LAMB2P55268 1798 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 C10orf71Q711Q0 1435 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 ABLIM1O14639 778 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 NPM3O75607 178 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 RTN3O95197 1032 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PSMB4P28070 264 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 NME5P56597 212 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PRPSAP1Q14558 356 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 DLG2Q15700 870 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 OR52E8Q6IFG1 317 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 STYK1Q6J9G0 422 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms