RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PCLAFQ15004 111 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 NADK2Q4G0N4 442 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 SLC9B1Q4ZJI4 515 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 C6orf52Q5T4I8 152 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 FAM183BPQ6ZVS7 135 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ARHGAP18Q8N392 663 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 NME8Q8N427 588 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF781Q8N8C0 355 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 SLC4A11Q8NBS3 891 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.45□□□□□ -0.746e-12■■■□□ 19.2
PTPRA-203ENST00000356147 GSDMBQ8TAX9 411 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ABTB1Q969K4 478 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 GPRASP2Q96D09 838 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 OLFM3Q96PB7 478 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 HAPLN3Q96S86 360 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 SORT1Q99523 831 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 PRPF18Q99633 342 aaKnown RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 UNKQ9C0B0 810 aaKnown RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 DHX33Q9H6R0 707 aaKnown RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 COPS7BQ9H9Q2 264 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 FAM49BQ9NUQ9 324 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 PCDHGC3Q9UN70 934 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 EFR3BQ9Y2G0 817 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 COMMD3-BMI1R4GMX3 469 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 INO80B-WBP1J3KQ70 363 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 APOL1O14791 398 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 HOXC6P09630 235 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SMIM18P0DKX4 95 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SAT1P21673 171 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 GPD1P21695 349 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ALDH1A3P47895 512 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 NUDT2P50583 147 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PTPN11Q06124 597 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PDK1Q15118 436 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 DLG2Q15700 870 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ANKRD20A4Q4UJ75 823 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF667Q5HYK9 610 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 MAP1SQ66K74 1059 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CEP70Q8NHQ1 597 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 DCUN1D1Q96GG9 259 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 OR52B2Q96RD2 323 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 EBNA1BP2Q99848 306 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 INO80BQ9C086 356 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CAB39LQ9H9S4 337 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 LIN28AQ9H9Z2 209 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ASNSD1Q9NWL6 643 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SEPT10Q9P0V9 454 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 LZTS1Q9Y250 596 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 KIAA1217Q5T5P2 1943 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 H0YCG3 227 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 MAGEB3O15480 346 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 FAM189A1O60320 539 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 MSCO60682 206 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 USP12O75317 370 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SPAG6O75602 509 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 TFAP2AP05549 437 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PCSK6P29122 969 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CDH5P33151 784 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 FKBP1AP62942 108 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 HNRNPDQ14103 355 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PPP2R5DQ14738 602 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 R3HDM1Q15032 1099 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 FAM219BQ5XKK7 198 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PLD6Q8N2A8 252 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 NSUN6Q8TEA1 469 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 NCSTNQ92542 709 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 DHX35Q9H5Z1 703 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 XPNPEP3Q9NQH7 507 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 HES2Q9Y543 173 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SF3B1O75533 1304 aaKnown RBP eCLIP10.44□□□□□ -0.743e-6■■■■■ 89.2
PTPRA-203ENST00000356147 LY75O60449 1722 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 GOLGA8TH3BQL2 631 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 VILLO15195 856 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CCNT2O60583 730 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PLIN3O60664 434 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CLPTM1O96005 669 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 IL1BP01584 269 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CYP3A5P20815 502 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 MGAT1P26572 445 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 FDFT1P37268 417 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 TFDP2Q14188 446 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 CNGA3Q16281 694 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PABPC1LQ4VXU2 614 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 TMEM198Q66K66 360 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 NAPRTQ6XQN6 538 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SESTD1Q86VW0 696 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PPP4R1Q8TF05 950 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SNRNP25Q9BV90 132 aaKnown RBP10.44□□□□□ -0.74
PTPRA-203ENST00000356147 COG4Q9H9E3 785 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 PCDH18Q9HCL0 1135 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ATXN10Q9UBB4 475 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 HSFX1Q9UBD0 423 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SIX4Q9UIU6 781 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF180Q9UJW8 692 aa10.44□□□□□ -0.74
PTPRA-203ENST00000356147 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 FAM159BA6NKW6 160 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms