RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ENO4A6NNW6 628 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PARNO95453 639 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 MAPTP10636 758 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 TNNI3P19429 210 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 CD151P48509 253 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 AGKQ53H12 422 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PNMA5Q96PV4 448 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 NOD2Q9HC29 1040 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 GJB6O95452 261 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PRLRP16471 622 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 ELK3P41970 407 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 CDH17Q12864 832 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 FSCN1Q16658 493 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DOK6Q6PKX4 331 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 RGS5O15539 181 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 USP17L7P0C7H9 530 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 HSPA13P48723 471 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PLD1Q13393 1074 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 SEMA4DQ92854 862 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DMAP1Q9NPF5 467 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 SH3BP4Q9P0V3 963 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 TUBGCP4Q9UGJ1 667 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 RBAK-RBAKDNI3L0D1 243 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 BDNFP23560 247 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ZNF268Q14587 947 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 RASA2Q15283 850 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 CDKAL1Q5VV42 579 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 HTR3CQ8WXA8 447 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 FAM120BQ96EK7 910 aaKnown RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 UBDO15205 165 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 AMHP03971 560 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 AMPD2Q01433 879 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TGM3Q08188 693 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TRAF2Q12933 501 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ZFPM1Q8IX07 1006 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TMEM159Q96B96 161 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 PCDH9Q9HC56 1237 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ACKR2O00590 384 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 MPOP05164 745 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 NQO1P15559 274 aaKnown RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 CYP2A7P20853 494 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 PEX5P50542 639 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 FAM9CQ8IZT9 166 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 MYCBPAPQ8TBZ2 947 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 GLI1P08151 1106 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 FGD2Q7Z6J4 655 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 RGS18Q9NS28 235 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 FBXO10Q9UK96 956 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TRIM17Q9Y577 477 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
SCN8A-202ENST00000355133 MAGEB16A2A368 324 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCN8A-202ENST00000355133 PSMA3P25788 255 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 ITIH4Q14624 930 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 GLT6D1Q7Z4J2 308 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 PARVBQ9HBI1 364 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 NAALADL1Q9UQQ1 740 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 SALL1Q9NSC2 1324 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 PPRC1Q5VV67 1664 aaKnown RBP13.52□□□□□ -0.24
SCN8A-202ENST00000355133 SNTNA6NMZ2 147 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 KCNK1O00180 336 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 EML1O00423 815 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 LTFP02788 710 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 PYGMP11217 842 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 NECAB2Q7Z6G3 386 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.24
SCN8A-202ENST00000355133 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ANKRD63C9JTQ0 380 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 FAM47E-STBD1D6RA91 191 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 KRT20P35900 424 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 MLH1P40692 756 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 VAC14Q08AM6 782 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 CEP78Q5JTW2 689 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ASB7Q9H672 318 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 GAKO14976 1311 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms