RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 FIS1Q9Y3D6 152 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 C2CD2LO14523 706 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 CES1P23141 567 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 FOXP4Q8IVH2 680 aaPredicted RBP8.22□□□□□ -1.09
HTT-201ENST00000355072 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 CKAP2Q8WWK9 683 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 ACTR6Q9GZN1 396 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
HTT-201ENST00000355072 IQSEC2Q5JU85 1478 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 STX16-NPEPL1H3BU86 382 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 ADAMDEC1O15204 470 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 AQP5P55064 265 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 SVOPLQ8N434 492 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 PAIP1Q9H074 479 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 TJP2Q9UDY2 1190 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 RUVBL2Q9Y230 463 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 AIM2O14862 343 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 COILP38432 576 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 POF1BQ8WVV4 589 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 HOPXQ9BPY8 73 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 MAF1Q9H063 256 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 MIEF1Q9NQG6 463 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 PRDX6P30041 224 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 FAM102AQ5T9C2 384 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 ZCCHC9Q8N567 271 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 URGCPQ8TCY9 931 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 GDPD5Q8WTR4 605 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 VANGL2Q9ULK5 521 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 FOXO3O43524 673 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 CYP1A1P04798 512 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 ATP6V1B2P21281 511 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 BCL7BQ9BQE9 202 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 SENP6Q9GZR1 1112 aaPredicted RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 LSM7Q9UK45 103 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 LTN1O94822 1766 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 TNS3Q68CZ2 1445 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 SNRNP35Q16560 246 aaKnown RBP8.21□□□□□ -1.09
HTT-201ENST00000355072 GDF3Q9NR23 364 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 LATS2Q9NRM7 1088 aa8.21□□□□□ -1.09
HTT-201ENST00000355072 TIE1P35590 1138 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 TXNRD1Q16881 649 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 FAM126BQ8IXS8 530 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CENPLQ8N0S6 344 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 OR6P1Q8NGX9 317 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CCDC189A1A4V9 331 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CLDN25C9JDP6 229 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PGK2P07205 417 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 TSPAN19P0C672 248 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 HUNKP57058 714 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 FBXW4P57775 412 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PLEKHG6Q3KR16 790 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 COBLL1Q53SF7 1204 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 hCG_2014768A0A024R1R8 64 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 ZNF701M0R085 212 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 NFKB1P19838 968 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PITPNAQ00169 270 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CMTR1Q8N1G2 835 aaKnown RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 AKAP1Q92667 903 aaKnown RBP eCLIP8.21□□□□□ -1.1
HTT-201ENST00000355072 NSMCE2Q96MF7 247 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CASS4Q9NQ75 786 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 FEM1BQ9UK73 627 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 ZNF608Q9ULD9 1512 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 A0A1W2PQ72 361 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 BCLAF3A2AJT9 711 aaKnown RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 INO80B-WBP1J3KQ70 363 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 SSNA1O43805 119 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PSMG1O95456 288 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 ADRA2BP18089 450 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CFL1P23528 166 aaKnown RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 SCNN1DP51172 638 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PEX6Q13608 980 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 FAM187BQ17R55 369 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 PITRM1Q5JRX3 1037 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 DENND1BQ6P3S1 775 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 MB21D2Q8IYB1 491 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 RTKNQ9BST9 563 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 ATP1A4Q13733 1029 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CHI3L2Q15782 390 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 DPY19L1Q2PZI1 675 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 EIF3MQ7L2H7 374 aaKnown RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 OTUD7AQ8TE49 926 aaPredicted RBP8.21□□□□□ -1.1
HTT-201ENST00000355072 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 THRBP10828 461 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 ELP6Q0PNE2 266 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 GTF2H3Q13889 308 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 DLGAP5Q15398 846 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 LXNQ9BS40 222 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 SPATA31D1Q6ZQQ2 1576 aa8.21□□□□□ -1.1
HTT-201ENST00000355072 CHADO15335 359 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 AP1S1P61966 158 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 GRHL2Q6ISB3 625 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 C4orf50Q6ZRC1 276 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms