RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TCHHL1Q5QJ38 904 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 APBA2Q99767 749 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 DDX28Q9NUL7 540 aaKnown RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 MAGEB16A2A368 324 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 CXCL11O14625 94 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 USP17L7P0C7H9 530 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 FAM71AQ8IYT1 594 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 YIPF2Q9BWQ6 316 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PTPRHQ9HD43 1115 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 A0A096LPK6 155 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 M0R3G1 203 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.226e-7■□□□□ 11.3
PTPN11-201ENST00000351677 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 ZNF280DQ6N043 979 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 ZFYVE19Q96K21 471 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 BAIAP3O94812 1187 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 VAPBO95292 243 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PBLDP30039 288 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PGS1Q32NB8 556 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 ARHGAP15Q53QZ3 475 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 APBB2Q92870 758 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PRR23AA6NEV1 266 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 UBDO15205 165 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PSMC3P17980 439 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 CLK1P49759 484 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 FUT2Q10981 343 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 PTF1AQ7RTS3 328 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 TLK2Q86UE8 772 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 SMARCD1Q96GM5 515 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 KLHL4Q9C0H6 718 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 IKZF4Q9H2S9 585 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 APPL1Q9UKG1 709 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 TNFSF9P41273 254 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 FMO1Q01740 532 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 HIST2H2ACQ16777 129 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 MAP1SQ66K74 1059 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 HIST2H2AA3Q6FI13 130 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 LPCAT1Q8NF37 534 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 MRPS31Q92665 395 aaKnown RBP16.41■□□□□ 0.22
PTPN11-201ENST00000351677 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 SYTL2Q9HCH5 934 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 THAP1Q9NVV9 213 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 ITM2BQ9Y287 266 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 UBIAD1Q9Y5Z9 338 aa16.41■□□□□ 0.22
PTPN11-201ENST00000351677 EGFRP00533 1210 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 LGALS2P05162 132 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 NFICP08651 508 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 ITGB6P18564 788 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 S100A5P33763 92 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 TBX4P57082 545 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 SPANXN3Q5MJ09 141 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 SPATA16Q9BXB7 569 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 VTA1Q9NP79 307 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 MLH1P40692 756 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 CYP51A1Q16850 503 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 CENPLQ8N0S6 344 aaPredicted RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 RECQL4O94761 1208 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 PRIM2P49643 509 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 ATP6AP1LQ52LC2 224 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 ZNF470Q6ECI4 717 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 C16orf46Q6P387 395 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 NCANO14594 1321 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 HNRNPRO43390 633 aaKnown RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 ATP9AO75110 1047 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 DAB1O75553 588 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 SHROOM1Q2M3G4 852 aaPredicted RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 GFM2Q969S9 779 aaKnown RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 PLEKHA8Q96JA3 519 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 CPNE1Q99829 537 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 TLR8Q9NR97 1041 aaKnown RBP16.4■□□□□ 0.22
PTPN11-201ENST00000351677 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
PTPN11-201ENST00000351677 SMNDC1O75940 238 aaKnown RBP eCLIP16.39■□□□□ 0.22
PTPN11-201ENST00000351677 TPBGLP0DKB5 382 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 ITGALP20701 1170 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 DNAJB2P25686 324 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 ABCG1P45844 678 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 PEX5P50542 639 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 VGLL4Q14135 290 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.22
PTPN11-201ENST00000351677 TRIM60Q495X7 471 aa16.39■□□□□ 0.22
PTPN11-201ENST00000351677 PPP1R10Q96QC0 940 aaKnown RBP16.39■□□□□ 0.22
PTPN11-201ENST00000351677 ATRNO75882 1429 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 BANF1O75531 89 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms