RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ARL5CA6NH57 179 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 DPYSL4O14531 572 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 SCNN1GP51170 649 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 RASA2Q15283 850 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 RCN1Q15293 331 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 CMPK2Q5EBM0 449 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 CCSAPQ6IQ19 270 aaPredicted RBP22.03■■□□□ 1.12
PTPN18-202ENST00000347849 RNF169Q8NCN4 708 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 ZNF333Q96JL9 665 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 SNRNP25Q9BV90 132 aaKnown RBP22.03■■□□□ 1.12
PTPN18-202ENST00000347849 TRIM55Q9BYV6 548 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 PPCSQ9HAB8 311 aa22.03■■□□□ 1.12
PTPN18-202ENST00000347849 TRMT13Q9NUP7 481 aaKnown RBP22.03■■□□□ 1.12
PTPN18-202ENST00000347849 GYG2O15488 501 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 HNRNPCL1O60812 293 aaKnown RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 HAUS5O94927 633 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 KPNB1Q14974 876 aaKnown RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 SNX30Q5VWJ9 437 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ANKRD22Q5VYY1 191 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 PIGZQ86VD9 579 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ZC3H18Q86VM9 953 aaKnown RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 PRR11Q96HE9 360 aaPredicted RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 NSL1Q96IY1 281 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 SSU72Q9NP77 194 aaKnown RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 FBXO6Q9NRD1 293 aaPredicted RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 PADI3Q9ULW8 664 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 CASTOR2A6NHX0 329 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 WARSP23381 471 aaKnown RBP22.02■■□□□ 1.12
PTPN18-202ENST00000347849 PHBP35232 272 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 VHLP40337 213 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 NDUFV1P49821 464 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ARFIP2P53365 341 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ZBTB16Q05516 673 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ACSBG2Q5FVE4 666 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 ADGRD1Q6QNK2 874 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 RSPH3Q86UC2 560 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 FAM71DQ8N9W8 422 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 KLHDC9Q8NEP7 349 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 SPATA18Q8TC71 538 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 UCMAQ8WVF2 138 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 DLGAP2Q9P1A6 1054 aa22.02■■□□□ 1.12
PTPN18-202ENST00000347849 I3L4J1 428 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 APOC4-APOC2K7ER74 178 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 MAP3K13O43283 966 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 KRT36O76013 467 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 APOC2P02655 101 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 SERPINB3P29508 390 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 EIF3EP60228 445 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 C11orf91Q3C1V1 193 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 C1orf228Q6PIY5 440 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 TOP6BLQ8N6T0 577 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 NRG4Q8WWG1 115 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PTCD3Q96EY7 689 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 SENP8Q96LD8 212 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 TSC22D3Q99576 134 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 C11orf84Q9BUA3 381 aaPredicted RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 RSAD1Q9HA92 442 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PCDH9Q9HC56 1237 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 RBP3P10745 1247 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PTPN1P18031 435 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 RPL22P35268 128 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 RPL34P49207 117 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PITX1P78337 314 aaPredicted RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 SARNPP82979 210 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PAN2Q504Q3 1202 aaKnown RBP22.01■■□□□ 1.11
PTPN18-202ENST00000347849 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PQLC3Q8N755 202 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 BANPQ8N9N5 519 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 DTX3LQ8TDB6 740 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 SH3GL3Q99963 347 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 TSSK1BQ9BXA7 367 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 VPS11Q9H270 941 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 PCDH18Q9HCL0 1135 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 CRTAC1Q9NQ79 661 aa22.01■■□□□ 1.11
PTPN18-202ENST00000347849 TCRBV7S3A2A0A539 114 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 GABRDO14764 452 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 THP07101 528 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 NEFHP12036 1026 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 LBRQ14739 615 aaKnown RBP22■■□□□ 1.11
PTPN18-202ENST00000347849 MDH1BQ5I0G3 518 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 SLC26A9Q7LBE3 791 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 PALM2Q8IXS6 379 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 FBXO36Q8NEA4 188 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 SCG3Q8WXD2 468 aaKnown RBP22■■□□□ 1.11
PTPN18-202ENST00000347849 MCUR1Q96AQ8 359 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 RNF157Q96PX1 679 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 TMEM30AQ9NV96 361 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 C2orf71A6NGG8 1288 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 ARL4CP56559 192 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 NKX3-2P78367 333 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 ADIGQ0VDE8 80 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 KRT81Q14533 505 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 PPP6R3Q5H9R7 873 aaPredicted RBP22■■□□□ 1.11
PTPN18-202ENST00000347849 RINLQ6ZS11 566 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 ATP11CQ8NB49 1132 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 PCDH19Q8TAB3 1148 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 FAM136AQ96C01 138 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 TNIP3Q96KP6 325 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 TSPAN18Q96SJ8 248 aa22■■□□□ 1.11
PTPN18-202ENST00000347849 FARP1Q9Y4F1 1045 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms