RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CAPN12Q6ZSI9 719 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 COQ6Q9Y2Z9 468 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DCKP27707 260 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GALNT3Q14435 633 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PTPN21Q16825 1174 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TMTC4Q5T4D3 741 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 AADATQ8N5Z0 425 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 NPLOC4Q8TAT6 608 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCNN1Q92952 543 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 OSBPL7Q9BZF2 842 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCNN2Q9H2S1 579 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TM9SF3Q9HD45 589 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GDF3Q9NR23 364 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ANAPC2Q9UJX6 822 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CDH9Q9ULB4 789 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF451Q9Y4E5 1061 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SLC35F4A4IF30 521 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 C2CD2LO14523 706 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SYN3O14994 580 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CDH6P55285 790 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PRMT2P55345 433 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SLC14A2Q15849 920 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCTD16Q68DU8 428 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RASAL3Q86YV0 1011 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TERB2Q8NHR7 220 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TTC8Q8TAM2 541 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RAD51AP1Q96B01 352 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ERP27Q96DN0 273 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF333Q96JL9 665 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SMURF2Q9HAU4 748 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 POLE4Q9NR33 117 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TGM2P21980 687 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RPS7P62081 194 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PADI6Q6TGC4 694 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 WNK4Q96J92 1243 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PPP1R16BQ96T49 567 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CLEC4AQ9UMR7 237 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CLCA1A8K7I4 914 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 WEE1P30291 646 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RAB5BP61020 215 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 AP1S1P61966 158 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 EIF2S3LQ2VIR3 472 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 USP41Q3LFD5 358 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 INTS6LQ5JSJ4 861 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZSCAN29Q8IWY8 852 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SUPT20HQ8NEM7 779 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ENGASEQ8NFI3 743 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 COL26A1Q96A83 441 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 BDH2Q9BUT1 245 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DPEP3Q9H4B8 488 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 NDUFAF1Q9Y375 327 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SHOXO15266 292 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 REM1O75628 298 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 IFNAR1P17181 557 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RALGDSQ12967 914 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PROM2Q8N271 834 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DCLK2Q8N568 766 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 A0A1B0GVM2 712 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KRT33AO76009 404 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SLC2A3P11169 496 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 UGT1A4P22310 534 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 UGT1A5P35504 534 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PSMC5P62195 406 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PRPSAP1Q14558 356 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MEA1Q16626 185 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LEXMQ3ZCV2 418 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 IZUMO2Q6UXV1 221 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SFRP1Q8N474 314 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF347Q96SE7 839 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SH3BGRL2Q9UJC5 107 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 M0QZ92 97 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DMC1Q14565 340 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZBED5Q49AG3 693 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 IYDQ6PHW0 289 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CDC37L1Q7L3B6 337 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 INTS10Q9NVR2 710 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MRPL22Q9NWU5 206 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DMGDHQ9UI17 866 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PCDHGB4Q9UN71 923 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DYRK1BQ9Y463 629 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SERPINA5P05154 406 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZCCHC18P0CG32 403 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PSMC2P35998 433 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ATP5IP56385 69 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TEFQ10587 303 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MTX1Q13505 466 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 VMACQ2NL98 169 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CDONQ4KMG0 1287 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 EMILIN2Q9BXX0 1053 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 HPF1Q9NWY4 346 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 XPR1Q9UBH6 696 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PLAGL2Q9UPG8 496 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 USP42Q9H9J4 1324 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NR3C2P08235 984 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ALX1Q15699 326 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ANKS1BQ7Z6G8 1248 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RIOX2Q8IUF8 465 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF655Q8N720 491 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 C12orf50Q8NA57 414 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PROX1Q92786 737 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms