RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ZNF781Q8N8C0 355 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 NLRP7Q8WX94 980 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 EME1Q96AY2 570 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SORT1Q99523 831 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
CLCN1-201ENST00000343257 ST6GALNAC4Q9H4F1 302 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SEPT9Q9UHD8 586 aaPredicted RBP15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SLC15A5A6NIM6 579 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 EXTL3O43909 919 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 PSMC3P17980 439 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 L1CAMP32004 1257 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SLC10A2Q12908 348 aaPredicted RBP15.31■□□□□ 0.04
CLCN1-201ENST00000343257 MTERF2Q49AM1 385 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 NXNQ6DKJ4 435 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 CLVS1Q8IUQ0 354 aaPredicted RBP15.31■□□□□ 0.04
CLCN1-201ENST00000343257 AHI1Q8N157 1196 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SMYD1Q8NB12 490 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 TMEM216Q9P0N5 145 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 EBF1Q9UH73 591 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 CYTH4Q9UIA0 394 aa15.31■□□□□ 0.04
CLCN1-201ENST00000343257 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SERPINB2P05120 415 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ETFBP38117 255 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 GRAMD4Q6IC98 578 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TAAR1Q96RJ0 339 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 COA1Q9GZY4 146 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 PAIP1Q9H074 479 aaKnown RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 POLR3FQ9H1D9 316 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 RAB26Q9ULW5 256 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ADAMTSL1Q8N6G6 1762 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TCRBV5S1A1TA0A578 114 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ZBED1O96006 694 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SLC5A3P53794 718 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 PCLAFQ15004 111 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 C15orf59Q2T9L4 293 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TMEM198Q66K66 360 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 NCCRP1Q6ZVX7 275 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 FASTKD5Q7L8L6 764 aaKnown RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 CMC1Q7Z7K0 106 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 RCN3Q96D15 328 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 MSTO1Q9BUK6 570 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 RMI1Q9H9A7 625 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 CISHQ9NSE2 258 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SELENONQ9NZV5 590 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 C6orf203Q9P0P8 240 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TUBGCP4Q9UGJ1 667 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TCP10L2B9ZVM9 353 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 HSPA4LO95757 839 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 RALBP11234 206 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 RXRGP48443 463 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 NDST2P52849 883 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 PGGT1BP53609 377 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ATP1A4Q13733 1029 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 KRT80Q6KB66 452 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ATP6V1E2Q96A05 226 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 ZNF696Q9H7X3 374 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLCN1-201ENST00000343257 EPS15L1Q9UBC2 864 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 PSAT1Q9Y617 370 aa15.3■□□□□ 0.04
CLCN1-201ENST00000343257 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 PLOD2O00469 737 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 RNASEH2AO75792 299 aaKnown RBP15.29■□□□□ 0.04
CLCN1-201ENST00000343257 TNFSF9P41273 254 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 SESN2P58004 480 aaPredicted RBP15.29■□□□□ 0.04
CLCN1-201ENST00000343257 DGKZQ13574 1117 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 SWSAP1Q6NVH7 229 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 DSELQ8IZU8 1212 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 DDI1Q8WTU0 396 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 KLHL32Q96NJ5 620 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 PEBP4Q96S96 227 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 TCHPQ9BT92 498 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 MTMR12Q9C0I1 747 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 USP18Q9UMW8 372 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 RNF11Q9Y3C5 154 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 C7orf72A4D263 438 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 TMEM221A6NGB7 291 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
CLCN1-201ENST00000343257 HMGCRP04035 888 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 GTF2A2P52657 109 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 OSTNP61366 133 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 TMEM79Q9BSE2 394 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 FAIMQ9NVQ4 179 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 RIMS3Q9UJD0 308 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 BARX2Q9UMQ3 279 aaPredicted RBP15.29■□□□□ 0.04
CLCN1-201ENST00000343257 SCAF8Q9UPN6 1271 aaKnown RBP15.29■□□□□ 0.04
CLCN1-201ENST00000343257 SORCS3Q9UPU3 1222 aa15.29■□□□□ 0.04
CLCN1-201ENST00000343257 ARHGEF37A1IGU5 675 aa15.28■□□□□ 0.04
CLCN1-201ENST00000343257 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
CLCN1-201ENST00000343257 BIRC5O15392 142 aa15.28■□□□□ 0.04
CLCN1-201ENST00000343257 PLIN3O60664 434 aa15.28■□□□□ 0.04
CLCN1-201ENST00000343257 SPAG6O75602 509 aa15.28■□□□□ 0.04
CLCN1-201ENST00000343257 METTL18O95568 372 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms