RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CNBD2Q96M20 576 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 PEBP4Q96S96 227 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 SERPINI1Q99574 410 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 HAUS8Q9BT25 410 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 PDZD7Q9H5P4 517 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 IFT122Q9HBG6 1241 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 FBXO28Q9NVF7 368 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
HOXA1-201ENST00000343060 CYTH4Q9UIA0 394 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 APPL1Q9UKG1 709 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 GNEQ9Y223 722 aaKnown RBP9.96□□□□□ -0.82
HOXA1-201ENST00000343060 PCDHA10Q9Y5I2 948 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 SQORQ9Y6N5 450 aa9.96□□□□□ -0.82
HOXA1-201ENST00000343060 DOCK5Q9H7D0 1870 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 DKC1O60832 514 aaKnown RBP eCLIP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 IDO1P14902 403 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PROZP22891 400 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 GLDCP23378 1020 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TXNL4AP83876 142 aaKnown RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 CBX3Q13185 183 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 NAB1Q13506 487 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PEX6Q13608 980 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PDE1CQ14123 709 aaPredicted RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PIGGQ5H8A4 983 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 C1QTNF12Q5T7M4 302 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SCARA3Q6AZY7 606 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 EPGNQ6UW88 154 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 C16orf89Q6UX73 402 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SMYD1Q8NB12 490 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 ATP6V0A1Q93050 837 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 CSRNP1Q96S65 589 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SHCBP1LQ9BZQ2 653 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TJP2Q9UDY2 1190 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 BCAP29Q9UHQ4 241 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 USP18Q9UMW8 372 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PCDHB12Q9Y5F1 795 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SH3PXD2BA1X283 911 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 H3BSA7 217 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 H7C0C1 242 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SLC22A2O15244 555 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 DCXO43602 365 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 HNRNPCP07910 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TGM2P21980 687 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 KCNA4P22459 653 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 ATP5OP48047 213 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TGFB2P61812 414 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 MMRN1Q13201 1228 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TMED1Q13445 227 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 SYCP2LQ5T4T6 812 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 C16orf46Q6P387 395 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 WDR49Q8IV35 697 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 C10orf107Q8IVU9 208 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 BRSK2Q8IWQ3 736 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TMEM102Q8N9M5 508 aaPredicted RBP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 DEPDC1BQ8WUY9 529 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 HSPH1Q92598 858 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 MCRS1Q96EZ8 462 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 CALN1Q9BXU9 219 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.95□□□□□ -0.82
HOXA1-201ENST00000343060 PCDH18Q9HCL0 1135 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TMOD2Q9NZR1 351 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 DCDC2Q9UHG0 476 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 TCEAL9Q9UHQ7 104 aa9.95□□□□□ -0.82
HOXA1-201ENST00000343060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 MYOCOSA0A1B0GUC4 107 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 POLRMTO00411 1230 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 KCNN4O15554 427 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CAP2P40123 477 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ACADVLP49748 655 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 THOP1P52888 689 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 MRPS22P82650 360 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ZYXQ15942 572 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 C6orf52Q5T4I8 152 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 IYDQ6PHW0 289 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 POTEHQ6S545 545 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 AMIGO2Q86SJ2 522 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ABTB1Q969K4 478 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ZBTB45Q96K62 511 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 RNF157Q96PX1 679 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 MSTO1Q9BUK6 570 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CDH19Q9H159 772 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 COPG2Q9UBF2 871 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 GABBR1Q9UBS5 961 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PCSK1NQ9UHG2 260 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 WDR37Q9Y2I8 494 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CDY2AQ9Y6F7 541 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CDY1Q9Y6F8 540 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 LOC100653049A0A140TA62 436 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 TPP1O14773 563 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 MAGEB3O15480 346 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms