RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 FGFR1OP2Q9NVK5 253 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 SIP14410 1827 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 MCF2LO15068 1137 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.25
COL18A1-201ENST00000342220 IZUMO3Q5VZ72 239 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 VSTM1Q6UX27 236 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 FAM81AQ8TBF8 368 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 LINC01599Q8WXQ3 324 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 SNF8Q96H20 258 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 DCLK3Q9C098 648 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.25
COL18A1-201ENST00000342220 SLC12A4Q9UP95 1085 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 DERAQ9Y315 318 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 ENPP3O14638 875 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 KCNN4O15554 427 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 SNX3O60493 162 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 CSF2RAP15509 400 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 ITIH2P19823 946 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 KDELR1P24390 212 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 LHX1P48742 406 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 DNAJC14Q6Y2X3 702 aaPredicted RBP13.52□□□□□ -0.25
COL18A1-201ENST00000342220 TBC1D1Q86TI0 1168 aaPredicted RBP13.52□□□□□ -0.25
COL18A1-201ENST00000342220 AGAP3Q96P47 875 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 KIAA1257Q9ULG3 409 aa13.52□□□□□ -0.25
COL18A1-201ENST00000342220 PSTPIP1O43586 416 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 TBX18O95935 607 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 GOT1P17174 413 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 ZNF143P52747 638 aaPredicted RBP13.51□□□□□ -0.25
COL18A1-201ENST00000342220 SNX16P57768 344 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.253e-7■■□□□ 11.7
COL18A1-201ENST00000342220 BBS9Q3SYG4 887 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 MAP7D3Q8IWC1 876 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 CCDC63Q8NA47 563 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 EXD1Q8NHP7 514 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 USP33Q8TEY7 942 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 CELF6Q96J87 481 aaKnown RBP13.51□□□□□ -0.25
COL18A1-201ENST00000342220 SMOQ99835 787 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 OSBPL1AQ9BXW6 950 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 NOP53Q9NZM5 478 aaKnown RBP13.51□□□□□ -0.25
COL18A1-201ENST00000342220 AP4E1Q9UPM8 1137 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 C2CD4BA6NLJ0 364 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 UBOX5O94941 541 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 MAGEA8P43361 318 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 AP1B1Q10567 949 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 MPP2Q14168 576 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 CYP4X1Q8N118 509 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 SLCO2A1Q92959 643 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 SERPINB12Q96P63 405 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 TTC4O95801 387 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
COL18A1-201ENST00000342220 ARL4AP40617 200 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 MXRA7P84157 204 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 DUSP4Q13115 394 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 BTBD8Q5XKL5 378 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 NUGGCQ68CJ6 796 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 OLFML1Q6UWY5 402 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 TTC39CQ8N584 583 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 ATL2Q8NHH9 583 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
COL18A1-201ENST00000342220 GDF10P55107 478 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 PTK6Q13882 451 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 STILQ15468 1287 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 CASC4Q6P4E1 433 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
COL18A1-201ENST00000342220 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 PIDD1Q9HB75 910 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 BLOC1S6Q9UL45 172 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 C9IYK1 514 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 ZBED1O96006 694 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 TAP1Q03518 808 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 ENPEPQ07075 957 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 PPP1R21Q6ZMI0 780 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 PAQR9Q6ZVX9 377 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 TAS1R1Q7RTX1 841 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 TOP6BLQ8N6T0 577 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 CCDC110Q8TBZ0 833 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 SAYSD1Q9NPB0 183 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
COL18A1-201ENST00000342220 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
COL18A1-201ENST00000342220 KCNK1O00180 336 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 GSTA1P08263 222 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 GBE1Q04446 702 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 GAD2Q05329 585 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 FAM126BQ8IXS8 530 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 KATNAL2Q8IYT4 538 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 PAF1Q8N7H5 531 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms