RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 C3orf20Q8ND61 904 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 BEST2Q8NFU1 509 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 KLHL6Q8WZ60 621 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 CCDC43Q96MW1 224 aaKnown RBP5.05□□□□□ -1.6
MSL1-201ENST00000339569 ADPGKQ9BRR6 497 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 CCDC94Q9BW85 323 aaPredicted RBP5.05□□□□□ -1.6
MSL1-201ENST00000339569 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.05□□□□□ -1.6
MSL1-201ENST00000339569 RNPEPQ9H4A4 650 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 LRRC19Q9H756 370 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 RPF1Q9H9Y2 349 aaKnown RBP5.05□□□□□ -1.6
MSL1-201ENST00000339569 CERS4Q9HA82 394 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 STARD7Q9NQZ5 370 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 SPTBN5Q9NRC6 3674 aaKnown RBP5.05□□□□□ -1.6
MSL1-201ENST00000339569 KIAA1549LQ6ZVL6 1849 aa5.05□□□□□ -1.6
MSL1-201ENST00000339569 NYNRINQ9P2P1 1898 aaKnown RBP5.05□□□□□ -1.6
MSL1-201ENST00000339569 ZSCAN5CA6NGD5 496 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 SIGLEC16A6NMB1 481 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SYN3O14994 580 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 EPHB6O15197 1021 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 IRAK2O43187 625 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 GRK2P25098 689 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 LIMK1P53667 647 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PLA2G4FQ68DD2 849 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 FAM171BQ6P995 826 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SEPT14Q6ZU15 432 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ALDH16A1Q8IZ83 802 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 MCOLN2Q8IZK6 566 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 WHAMMQ8TF30 809 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 POMGNT1Q8WZA1 660 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 TRIB2Q92519 343 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SEMA4DQ92854 862 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ERCC4Q92889 916 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 IFT43Q96FT9 208 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 CNDP1Q96KN2 507 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SPATA17Q96L03 361 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PPP1R2P1Q96PQ5 205 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 HNRNPABQ99729 332 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 LRFN3Q9BTN0 628 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 IFIH1Q9BYX4 1025 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 LIN28AQ9H9Z2 209 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 SCUBE2Q9NQ36 999 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 NKIRAS2Q9NYR9 191 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 COQ3Q9NZJ6 369 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SIX4Q9UIU6 781 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 NEU2Q9Y3R4 380 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 A0A0U1RQF3 1178 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 WASH4PA8MWX3 477 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 TRIM38O00635 465 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 EIF3HO15372 352 aaKnown RBP eCLIP5.04□□□□□ -1.6
MSL1-201ENST00000339569 SART1O43290 800 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 ADCY6O43306 1168 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SUSD5O60279 629 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 APBB3O95704 486 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 GSTA2P09210 222 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 RARBP10826 455 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 HSD3B1P14060 373 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 HOXC12P31275 282 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 MAGEA1P43355 309 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 LHX1P48742 406 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 CUL1Q13616 776 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 SMAD2Q15796 467 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 TIGD6Q17RP2 521 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 FBXO47Q5MNV8 452 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 CFAP58Q5T655 872 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ALKBH5Q6P6C2 394 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 LRIG3Q6UXM1 1119 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 C1orf127Q8N9H9 656 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ATG16L2Q8NAA4 619 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 EXD1Q8NHP7 514 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 FOXJ1Q92949 421 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 NTAN1Q96AB6 310 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ZNF845Q96IR2 970 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PLVAPQ9BX97 442 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 TXLNGYQ9BZA5 131 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 TRIT1Q9H3H1 467 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 RC3H2Q9HBD1 1191 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 DMRT3Q9NQL9 472 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 POLR3KQ9Y2Y1 108 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 TRAF6Q9Y4K3 522 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 REV3LO60673 3130 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ARVCFO00192 962 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 MAP2K7O14733 419 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 HNRNPDLO14979 420 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 KIAA0355O15063 1070 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 ARF4P18085 180 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 RPL17P18621 184 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 SLC9A1P19634 815 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PEX2P28328 305 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 STIP1P31948 543 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 ACSL1P33121 698 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PPP3CCP48454 512 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 PPP5CP53041 499 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 EMP3P54852 163 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 STX17P56962 302 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 NLRP11P59045 1033 aaKnown RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 XRCC4Q13426 336 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 BTG3Q14201 252 aaPredicted RBP5.04□□□□□ -1.6
MSL1-201ENST00000339569 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
MSL1-201ENST00000339569 DHCR24Q15392 516 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms