RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SFMBT1Q9UHJ3 866 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 GAKO14976 1311 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 F5H5T6 163 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 TOMM70O94826 608 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 VAPBO95292 243 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 FMO1Q01740 532 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 DACT2Q5SW24 774 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 FOXR2Q6PJQ5 311 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 RIN3Q8TB24 985 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 TBC1D10AQ9BXI6 508 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 KCNK4Q9NYG8 393 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 NCANO14594 1321 aa14.1□□□□□ -0.15
RTN4-202ENST00000337526 KIF13AQ9H1H9 1805 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 NEURL4Q96JN8 1562 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ME2P23368 584 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 THPOP40225 353 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 MLH1P40692 756 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CDH18Q13634 790 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 TBCELQ5QJ74 424 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 LRRC38Q5VT99 294 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SLC22A9Q8IVM8 553 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 BBS7Q8IWZ6 715 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 DEFB106AQ8N104 65 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 STX19Q8N4C7 294 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 C4orf32Q8N8J7 132 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ART4Q93070 314 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ZNF184Q99676 751 aaPredicted RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 HSD17B14Q9BPX1 270 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 LACTBL1A8MY62 500 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ACAT1P24752 427 aaKnown RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 ALDH1A3P47895 512 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 PRIM2P49643 509 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CDK7P50613 346 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 MARC1Q5VT66 337 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SIKE1Q9BRV8 207 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 TBC1D12O60347 775 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 USP12O75317 370 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ATP6V1B2P21281 511 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 EFEMP1Q12805 493 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CSTF3Q12996 717 aaKnown RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 IRGCQ6NXR0 463 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SNX32Q86XE0 403 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 PIWIL2Q8TC59 973 aaKnown RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 DDX43Q9NXZ2 648 aaKnown RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 CYP39A1Q9NYL5 469 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 VTI1BQ9UEU0 232 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 RIC1Q4ADV7 1423 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SIGLEC16A6NMB1 481 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 GPR182O15218 404 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 TGFB1I1O43294 461 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 LIASO43766 372 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 PLA2G6O60733 806 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 RAG1P15918 1043 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 FASP25445 335 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CCR1P32246 355 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CNTN2Q02246 1040 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CCDC92Q53HC0 331 aaPredicted RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 CRELD2Q6UXH1 353 aaPredicted RBP14.09□□□□□ -0.15
RTN4-202ENST00000337526 TMEM161BQ8NDZ6 487 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 CPNE1Q99829 537 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 NMRAL1Q9HBL8 299 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 KCNH4Q9UQ05 1017 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 RAD54BQ9Y620 910 aa14.09□□□□□ -0.15
RTN4-202ENST00000337526 SAC3D1A6NKF1 404 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 FSCN2O14926 492 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SMNDC1O75940 238 aaKnown RBP eCLIP14.08□□□□□ -0.162e-15■■■□□ 16
RTN4-202ENST00000337526 ZNF157P51786 506 aaPredicted RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 APBA2Q99767 749 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SYT15Q9BQS2 421 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 CROTQ9UKG9 612 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 GOLGA8TH3BQL2 631 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 CRTAMO95727 393 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 ASS1P00966 412 aaKnown RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 PAX7P23759 505 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 NPY2RP49146 381 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 TTC30AQ86WT1 665 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SLC16A10Q8TF71 515 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 PWWP2AQ96N64 755 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 WDR18Q9BV38 432 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 CLPBQ9H078 707 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SLCO1B3Q9NPD5 702 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 PDGFCQ9NRA1 345 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 A0A0B4J269 797 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 FAM95CA0A1B0GW59 222 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 FCGR1AP12314 374 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms