RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GSTA2P09210 222 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 RRM1P23921 792 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 TFDP2Q14188 446 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 PIGHQ14442 188 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 YTHDF3Q7Z739 585 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 RBM23Q86U06 439 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 AFAP1L2Q8N4X5 818 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 HEY2Q9UBP5 337 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 YWHAQP27348 245 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 GATMP50440 423 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 ADIGQ0VDE8 80 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 FAAP100Q0VG06 881 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 CLEC16AQ2KHT3 1053 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 CRELD2Q6UXH1 353 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 ABHD8Q96I13 439 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 PPP1R36Q96LQ0 422 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 SH3BP1Q9Y3L3 701 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 XYLBO75191 536 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 IRF1P10914 325 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 CDH6P55285 790 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 ANKRD20A2Q5SQ80 823 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 ANKRD20A1Q5TYW2 823 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 MTDHQ86UE4 582 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 PDZD8Q8NEN9 1154 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 KRT35Q92764 455 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 MYLPFQ96A32 169 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
HDAC6-201ENST00000334136 SLC27A5Q9Y2P5 690 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 COQ4Q9Y3A0 265 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 SYN3O14994 580 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 RIPK2O43353 540 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 HSPA4LO95757 839 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 KRT10P13645 584 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 TLE6Q9H808 572 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 EPS15L1Q9UBC2 864 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 C9IYK1 514 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 F8VP50 259 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 M0QYT0 321 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 GIPC1O14908 333 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 BAIAP3O94812 1187 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 CBX6O95503 412 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 NPR3P17342 541 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 ESRRGP62508 458 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 PLD1Q13393 1074 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 ELAC1Q9H777 363 aaKnown RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 PSMC3IPQ9P2W1 217 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 OR4Q2P0C623 313 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 PYGMP11217 842 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 SLC1A1P43005 524 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 DYNC1I2Q13409 638 aaKnown RBP12.17□□□□□ -0.46
HDAC6-201ENST00000334136 MED21Q13503 144 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 SMTNL2Q2TAL5 461 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 ACCSLQ4AC99 568 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 RAD9AQ99638 391 aa12.17□□□□□ -0.46
HDAC6-201ENST00000334136 RTN3O95197 1032 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 BTKQ06187 659 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 TRIP10Q15642 601 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PLEKHG4Q58EX7 1191 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.467e-6■□□□□ 8.4
HDAC6-201ENST00000334136 DENND5BQ6ZUT9 1274 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ANKRD52Q8NB46 1076 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ATAD1Q8NBU5 361 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SPPL2BQ8TCT7 592 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 WNT8BQ93098 351 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 EPAS1Q99814 870 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 TLR8Q9NR97 1041 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 STK39Q9UEW8 545 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 CLDN5O00501 218 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 VNN1O95497 513 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 TTC4O95801 387 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms