RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 RASA2Q15283 850 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 GALNTL6Q49A17 601 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 JOSD2Q8TAC2 188 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SLC24A3Q9HC58 644 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 GPAMQ9HCL2 828 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SCAMP3O14828 347 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 ERVK-10P10266 1014 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 MARC1Q5VT66 337 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 TDRD5Q8NAT2 981 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 ABTB1Q969K4 478 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 DACT3Q96B18 629 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SLIT2O94813 1529 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 PSMB4P28070 264 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 JAG1P78504 1218 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 MRPS6P82932 125 aaKnown RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 NFE2Q16621 373 aaPredicted RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 B3GALNT2Q8NCR0 500 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 SHISA4Q96DD7 197 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 PHF21BQ96EK2 531 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ILDR2Q71H61 639 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ALLCQ8N6M5 410 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 C17orf80Q9BSJ5 609 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 NMRK2Q9NPI5 230 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 WWOXQ9NZC7 414 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 OPLAHO14841 1288 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ITGB6P18564 788 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 MAP2K5Q13163 448 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 INPP5AQ14642 412 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 RUBCNLQ9H714 662 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 RBAK-RBAKDNI3L0D1 243 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 EGFRP00533 1210 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 NPR3P17342 541 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 TFE3P19532 575 aaPredicted RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ITGA9Q13797 1035 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 RCN1Q15293 331 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 C16orf46Q6P387 395 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 LPCAT1Q8NF37 534 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 MRPS31Q92665 395 aaKnown RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 EME1Q96AY2 570 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 SRPK1Q96SB4 655 aaKnown RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 PCDHGB4Q9UN71 923 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 APOA4P06727 396 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 PGAM1P18669 254 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 TNFRSF8P28908 595 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 RHOAP61586 193 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ACAP1Q15027 740 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 SDHAF4Q5VUM1 108 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 PIGZQ86VD9 579 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 LENG1Q96BZ8 264 aaPredicted RBP13.35□□□□□ -0.27
VSTM4-202ENST00000332853 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 NAT9Q9BTE0 207 aa13.35□□□□□ -0.27
VSTM4-202ENST00000332853 M0R2N6 131 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 NCAM2O15394 837 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 DDX3YO15523 660 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 GLP2RO95838 553 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 UBTFL6P0CB48 400 aaPredicted RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 MYL4P12829 197 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 YWHAQP27348 245 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 SLC1A6P48664 564 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ARHGAP15Q53QZ3 475 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 COG4Q9H9E3 785 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 A0A0B4J269 797 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 HOXA2O43364 376 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 SOAT2O75908 522 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 VAPBO95292 243 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 C4BPAP04003 597 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 KCNK10P57789 538 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 RTP1P59025 263 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 HEATR9A2RTY3 570 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 RAMP2O60895 175 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TRIM16O95361 564 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 GOT1P17174 413 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ADRA1DP25100 572 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 CD52P31358 61 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TMED1Q13445 227 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 KBTBD12Q3ZCT8 623 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms