RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 SYPP08247 313 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 C7P10643 843 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 CD6P30203 668 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 IL12RB1P42701 662 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 DAOAP59103 153 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 LRMPQ12912 555 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 SEMA3BQ13214 749 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 FUT11Q495W5 492 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 WDR45BQ5MNZ6 344 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 MPP7Q5T2T1 576 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 TTI2Q6NXR4 508 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 MSANTD2Q6P1R3 559 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 UNC45BQ8IWX7 931 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 RBBP8NLQ8NC74 664 aaPredicted RBP18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 CADM4Q8NFZ8 388 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 ERCC4Q92889 916 aaPredicted RBP18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 AZIN2Q96A70 460 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 TMA16Q96EY4 203 aaKnown RBP18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 HSFY1Q96LI6 401 aa18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 USP36Q9P275 1121 aaKnown RBP18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 RALYQ9UKM9 306 aaKnown RBP18.48■□□□□ 0.55
PTPMT1-201ENST00000326656 ARHGAP33O14559 1287 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 GIPC1O14908 333 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 FBXO21O94952 628 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 IGLV3-19P01714 112 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 GNSP15586 552 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 MAPK8P45983 427 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 GCNT1Q02742 428 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 ZNF252P-AS1Q0IIN9 211 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 HNRNPDQ14103 355 aaKnown RBP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 KIAA1324Q6UXG2 1013 aaKnown RBP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 PIP4P1Q86T03 277 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 TMPRSS6Q8IU80 811 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 SLC41A1Q8IVJ1 513 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 HDDC3Q8N4P3 179 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 DEFB119Q8N690 84 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 ZNF557Q8N988 423 aaPredicted RBP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 LMO3Q8TAP4 145 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 WFIKKN2Q8TEU8 576 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 DNASE2BQ8WZ79 361 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 TFAP2BQ92481 460 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 NDRG1Q92597 394 aaKnown RBP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 HSPA12BQ96MM6 686 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 WSB2Q9NYS7 404 aaPredicted RBP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 MAN1B1Q9UKM7 699 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 PLA2G4CQ9UP65 541 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 PCDHB4Q9Y5E5 795 aa18.47■□□□□ 0.55
PTPMT1-201ENST00000326656 CKAP5Q14008 2032 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PPP1R3GB7ZBB8 358 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 IRAK2O43187 625 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 NCAM1P13591 858 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 CD44P16070 742 aaKnown RBP18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 HOXD9P28356 352 aaPredicted RBP18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 ARID5AQ03989 594 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 RING1Q06587 406 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 SLC14A1Q13336 389 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 ZNF234Q14588 700 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 NUGGCQ68CJ6 796 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PMF1Q6P1K2 205 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PPM1KQ8N3J5 372 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 EDEM1Q92611 657 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PRCCQ92733 491 aaPredicted RBP18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 GOLGA1Q92805 767 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 ZDHHC5Q9C0B5 715 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 CIPCQ9C0C6 399 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PCED1AQ9H1Q7 454 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 SFMBT1Q9UHJ3 866 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 CLEC4EQ9ULY5 219 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 CACNA1GO43497 2377 aa18.46■□□□□ 0.55
PTPMT1-201ENST00000326656 PCDH15Q96QU1 1955 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 OPHN1O60890 802 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 LCP1P13796 627 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 SLC11A2P49281 568 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 MARSP56192 900 aaKnown RBP18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 SMYD5Q6GMV2 418 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 SERPINA13PQ6UXR4 307 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 KIAA0907Q7Z7F0 614 aaPredicted RBP18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 RGL4Q8IZJ4 473 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 EHBP1Q8NDI1 1231 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 NELFBQ8WX92 580 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 TOE1Q96GM8 510 aaKnown RBP18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 NUP58Q9BVL2 599 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 FBRSQ9HAH7 460 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 DNAAF2Q9NVR5 837 aaKnown RBP18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 WASF3Q9UPY6 502 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 CNTN6Q9UQ52 1028 aa18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 ATXN2Q99700 1313 aaKnown RBP18.45■□□□□ 0.54
PTPMT1-201ENST00000326656 CHD6Q8TD26 2715 aa18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 RNF225M0QZC1 329 aaPredicted RBP18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 SART1O43290 800 aaKnown RBP18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 LTFP02788 710 aa18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 BMP6P22004 513 aa18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 HLA-FP30511 346 aa18.44■□□□□ 0.54
PTPMT1-201ENST00000326656 RPL34P49207 117 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms