RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 TRAFD1O14545 582 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 COX4I1P13073 169 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 CRHR1P34998 444 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 NR2C2P49116 596 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 CDK7P50613 346 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 HIRAP54198 1017 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 TNFAIP8L3Q5GJ75 292 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 LCA5Q86VQ0 697 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZCWPW1Q9H0M4 648 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 SLC7A8Q9UHI5 535 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 NFASCO94856 1347 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 TBC1D12O60347 775 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ACTR3P61158 418 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 GRAMD4Q6IC98 578 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 GRIP2Q9C0E4 1043 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 EML4Q9HC35 981 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 AFG3L2Q9Y4W6 797 aa13.1□□□□□ -0.31
DNMT3A-202ENST00000321117 GLI3P10071 1580 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 AP3B1O00203 1094 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 TMCC1O94876 653 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ERBB2P04626 1255 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 GNAZP19086 355 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ME2P23368 584 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 NRLP54845 237 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 CDC16Q13042 620 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 C16orf87Q6PH81 154 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 USP33Q8TEY7 942 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 UTP4Q969X6 686 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 CATSPER2Q96P56 530 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 EPAS1Q99814 870 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 COPS7BQ9H9Q2 264 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 MRGBPQ9NV56 204 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 PCDHGC3Q9UN70 934 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 TRPC5OSA6NMA1 111 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 RNF103O00237 685 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 WNT10BO00744 389 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ABL2P42684 1182 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 PKNOX1P55347 436 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 CCNA1P78396 465 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 TAF5Q15542 800 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 AMHR2Q16671 573 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 GRTP1Q5TC63 336 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 TOMM70O94826 608 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 RPL5P46777 297 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 SLC6A3Q01959 620 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 OGDHQ02218 1023 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 ELMO2Q96JJ3 720 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 PLEKHA5Q9HAU0 1116 aa13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-202ENST00000321117 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 SRP72O76094 671 aaKnown RBP13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 CNTN2Q02246 1040 aa13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 METTL7BQ6UX53 244 aa13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 B3GNT6Q6ZMB0 384 aa13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 ACO2Q99798 780 aaKnown RBP13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 ING2Q9H160 280 aa13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 RUVBL2Q9Y230 463 aaKnown RBP13.08□□□□□ -0.31
DNMT3A-202ENST00000321117 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 AVPR1AP37288 418 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 CCNG1P51959 295 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 XIAPP98170 497 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 FOLH1Q04609 750 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 INPP5AQ14642 412 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 NIPA2Q8N8Q9 360 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms