RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KRT10P13645 584 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 CORO1AP31146 461 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 KRT81Q14533 505 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 ATAT1Q5SQI0 421 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 ERMARDQ5T6L9 678 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 NETO2Q8NC67 525 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 RIN3Q8TB24 985 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 ZSCAN18Q8TBC5 510 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 ZFRQ96KR1 1074 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 FCRL2Q96LA5 508 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 OSBPL9Q96SU4 736 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 CDK5RAP1Q96SZ6 601 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 S1PR5Q9H228 398 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 POMKQ9H5K3 350 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 RRN3Q9NYV6 651 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 PCDHA3Q9Y5H8 950 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 CLUHO75153 1309 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 DENND4CQ5VZ89 1909 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 CCDC66A2RUB6 948 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 ZNF197O14709 1029 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 PSTPIP1O43586 416 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 PAGE1O75459 146 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 STC2O76061 302 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 ENDOD1O94919 500 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 APOEP02649 317 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 GBP2P32456 591 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 CXCR3P49682 368 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 TUBP50607 506 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 RWDD2BP57060 319 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 DYNLT1P63172 113 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 ACAP1Q15027 740 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 BEND5Q7L4P6 421 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 ARID3BQ8IVW6 561 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 NPAS3Q8IXF0 933 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 PGAP3Q96FM1 320 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 CALR3Q96L12 384 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 CFAP97Q9P2B7 532 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 FZD10Q9ULW2 581 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 MUC3AQ02505 3323 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 A0A0C4DFX4 3053 aa15.97■□□□□ 0.15
PDLIM5-202ENST00000318007 CEP104O60308 925 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 MAP3K6O95382 1288 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 F9P00740 461 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KLKB1P03952 638 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KRT7P08729 469 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 HOXB8P17481 243 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 POU3F3P20264 500 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 ADRA1BP35368 520 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 VIPR2P41587 438 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 PEX5P50542 639 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 EIF4EBP2Q13542 120 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 ARL13BQ3SXY8 428 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 EFHC2Q5JST6 749 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 RAP1GAP2Q684P5 730 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 RFWD3Q6PCD5 774 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 CCDC33Q8N5R6 958 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 CMASQ8NFW8 434 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KIF18AQ8NI77 898 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 USP13Q92995 863 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 MSLNLQ96KJ4 702 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KCTD15Q96SI1 283 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 TASP1Q9H6P5 420 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 MTMR10Q9NXD2 777 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SNX12Q9UMY4 172 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 GOT1P17174 413 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 HARS2P49590 506 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 ITIH3Q06033 890 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 PIK3R6Q5UE93 754 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 RWDD4Q6NW29 188 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 MFSD7Q6UXD7 560 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 CIR1Q86X95 450 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 LEMD2Q8NC56 503 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SMRP1Q8NCR6 262 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 ADAMTS19Q8TE59 1207 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SH3RF2Q8TEC5 729 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 HAUS1Q96CS2 278 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SLC39A13Q96H72 371 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 FAM118BQ9BPY3 351 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KLF16Q9BXK1 252 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 LCMT1Q9UIC8 334 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 VANGL2Q9ULK5 521 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 USP15Q9Y4E8 981 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 SAR1BQ9Y6B6 198 aa15.96■□□□□ 0.15
PDLIM5-202ENST00000318007 KCNU1A8MYU2 1149 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 MIF4GDA9UHW6 222 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 LEFTY2O00292 366 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 TSPAN3O60637 253 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 ZRANB2O95218 330 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 FGF19O95750 216 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 CTNNA2P26232 953 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 COG7P83436 770 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 MYEOVQ96EZ4 313 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 HERPUD2Q9BSE4 406 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 UBE2ZQ9H832 354 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 PRDM6Q9NQX0 595 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 TDP1Q9NUW8 608 aa15.95■□□□□ 0.14
PDLIM5-202ENST00000318007 OR12D3Q9UGF7 316 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms