RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SEPT12Q8IYM1 358 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC24Q8N4L8 307 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PDPRQ8NCN5 879 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PBXIP1Q96AQ6 731 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 FAR2Q96K12 515 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TCHPQ9BT92 498 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 OCEL1Q9H607 264 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GPRC5CQ9NQ84 441 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SCHIP1Q9P0W5 487 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 APPL1Q9UKG1 709 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF711Q9Y462 761 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SCN7AQ01118 1682 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC195A0A1B0GUA6 201 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 DDTLA6NHG4 134 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SLC15A5A6NIM6 579 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 P4HA1P13674 534 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NUMBP49757 651 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF143P52747 638 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 LINC00299Q6ZSB3 139 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 RNF157Q96PX1 679 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 UNKQ9C0B0 810 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SEPT3Q9UH03 358 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ZBTB21Q9ULJ3 1066 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NOP56O00567 594 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 APOL1O14791 398 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 DCXO43602 365 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TNNC2P02585 160 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 C1QAP02745 245 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SCNN1DP51172 638 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SLC25A11Q02978 314 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CAMK1DQ8IU85 385 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SCAIQ8N9R8 606 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TFB1MQ8WVM0 346 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 GPR101Q96P66 508 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CDRT15Q96T59 188 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PDCD2LQ9BRP1 358 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SNX25Q9H3E2 840 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 EIF2B3Q9NR50 452 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 BFARQ9NZS9 450 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PKD2L1Q9P0L9 805 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 RAP2CQ9Y3L5 183 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CYB561D2O14569 222 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 FGF3P11487 239 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 MIPP30301 263 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ALDH1B1P30837 517 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 MRPS5P82675 430 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF252P-AS1Q0IIN9 211 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TRAP1Q12931 704 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SLC39A4Q6P5W5 647 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 EXOC8Q8IYI6 725 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 LEMD2Q8NC56 503 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ABHD8Q96I13 439 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF670Q9BS34 389 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SLC2A11Q9BYW1 496 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 APOBEC3GQ9HC16 384 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CEPT1Q9Y6K0 416 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TNRC6CQ9HCJ0 1690 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 hCG_2014768A0A024R1R8 64 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 AP3B1O00203 1094 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TIMM44O43615 452 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 FBXO21O94952 628 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 APRTP07741 180 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PGAM1P18669 254 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NAMPTP43490 491 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CD151P48509 253 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NUDT2P50583 147 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 RPL14P50914 215 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 OGDHQ02218 1023 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 MDH1BQ5I0G3 518 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 EPGNQ6UW88 154 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SLC30A10Q6XR72 485 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 ADGRF2Q8IZF7 708 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 AFG1LQ8WV93 481 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 MCRS1Q96EZ8 462 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CDH19Q9H159 772 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM134Q9H6X4 195 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CYP3A43Q9HB55 503 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 MRM3Q9HC36 420 aaKnown RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 CISHQ9NSE2 258 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NSMCE4AQ9NXX6 385 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 COPG2Q9UBF2 871 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 RIMS3Q9UJD0 308 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 B3GNT3Q9Y2A9 372 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 NUB1Q9Y5A7 615 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 DLEC1Q9Y238 1755 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PRSS51A0A1B0GVH4 220 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TRPC5OSA6NMA1 111 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PAPSS1O43252 624 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-201ENST00000316707 GCATO75600 419 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 HMGCRP04035 888 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 S100A1P23297 94 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 PIK3R1P27986 724 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SDC4P31431 198 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 SERPINB5P36952 375 aa4.91□□□□□ -1.62
PTPN13-201ENST00000316707 TMED10P49755 219 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms