RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 EFTUD2Q15029 972 aaKnown RBP eCLIP18.98■□□□□ 0.632e-8■■■■□ 22.7
CCDC43-201ENST00000315286 LRRC14Q15048 493 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 QPCTQ16769 361 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 C4orf22Q6V702 233 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 BZW1Q7L1Q6 419 aaKnown RBP18.98■□□□□ 0.63
CCDC43-201ENST00000315286 MGARPQ8TDB4 240 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 HTR3CQ8WXA8 447 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 SLC24A2Q9UI40 661 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 HACD1B0YJ81 288 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 F9P00740 461 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 SELPP16109 830 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 IFNAR2P48551 515 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 SEMA3BQ13214 749 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 GPNMBQ14956 572 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 TRABD2AQ86V40 505 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 CAND1Q86VP6 1230 aaKnown RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 SPATA2LQ8IUW3 424 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 VPS52Q8N1B4 723 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 CHMP6Q96FZ7 201 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 ZNF317Q96PQ6 595 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 FTHL17Q9BXU8 183 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 ACSS3Q9H6R3 686 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 PNPLA8Q9NP80 782 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 PRG3Q9Y2Y8 225 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 ACTL7BQ9Y614 415 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 DCLK1O15075 740 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 NBNO60934 754 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 CDK7P50613 346 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 GEMIN4P57678 1058 aaKnown RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 CBLBQ13191 982 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 PAFAH1B3Q15102 231 aaKnown RBP18.97■□□□□ 0.63
CCDC43-201ENST00000315286 TP53INP2Q8IXH6 220 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 SCML4Q8N228 414 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 ANKRD42Q8N9B4 389 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 CCDC134Q9H6E4 229 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 WDCPQ9H6R7 721 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 PPCSQ9HAB8 311 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 KANSL3Q9P2N6 904 aa18.97■□□□□ 0.63
CCDC43-201ENST00000315286 KBTBD13C9JR72 458 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TMEM189-UBE2V1I3L0A0 370 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TSHRP16473 764 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ERCC2P18074 760 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 DRD4P21917 467 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 GRIK1P39086 918 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 CXCR3P49682 368 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 NR1H3Q13133 447 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 RASA2Q15283 850 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 C4orf50Q6ZRC1 276 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TAC4Q86UU9 113 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 SH3TC2Q8TF17 1288 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 FRMD8Q9BZ67 464 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 MLXIPLQ9NP71 852 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 SNX10Q9Y5X0 201 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 PATJQ8NI35 1801 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TET1Q8NFU7 2136 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 SF3B1O75533 1304 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 OAZ2O95190 189 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 AP1B1Q10567 949 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 IFRD2Q12894 506 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 PRKD1Q15139 912 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ARL13BQ3SXY8 428 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 SLC39A12Q504Y0 691 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ANKRD20A2Q5SQ80 823 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ANKRD20A1Q5TYW2 823 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ANKRD20A3Q5VUR7 823 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 ARHGEF18Q6ZSZ5 1173 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 MCUQ8NE86 351 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 DBF4BQ8NFT6 615 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 P2RY11Q96G91 374 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 FAM193BQ96PV7 902 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TKTL2Q9H0I9 626 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 PRDM12Q9H4Q4 367 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 PSMC3IPQ9P2W1 217 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-201ENST00000315286 FETUBQ9UGM5 382 aa18.96■□□□□ 0.63
CCDC43-201ENST00000315286 NUP205Q92621 2012 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 COL4A4P53420 1690 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-201ENST00000315286 A0A0A0MRY4 1105 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 ENPP3O14638 875 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 TNFRSF10BO14763 440 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 ATP2A2P16615 1042 aaKnown RBP18.95■□□□□ 0.62
CCDC43-201ENST00000315286 KRT15P19012 456 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 SLC5A3P53794 718 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 TPI1P60174 286 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 PDK1Q15118 436 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 CPLX4Q7Z7G2 160 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 FAM126BQ8IXS8 530 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 DQX1Q8TE96 717 aaKnown RBP18.95■□□□□ 0.62
CCDC43-201ENST00000315286 SPATA13Q96N96 652 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 DHRS4Q9BTZ2 278 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 KIF9Q9HAQ2 790 aa18.95■□□□□ 0.62
CCDC43-201ENST00000315286 PGFP49763 221 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 YWHAGP61981 247 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC43-201ENST00000315286 ARHGEF6Q15052 776 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 KLHL38Q2WGJ6 581 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 DENND5BQ6ZUT9 1274 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 ZNF534Q76KX8 674 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 CCNYQ8ND76 341 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms