RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.03
RUNX3-201ENST00000308873 CLEC4CQ8WTT0 213 aa15.27■□□□□ 0.03
RUNX3-201ENST00000308873 EBNA1BP2Q99848 306 aaKnown RBP15.27■□□□□ 0.03
RUNX3-201ENST00000308873 PCDH18Q9HCL0 1135 aa15.27■□□□□ 0.03
RUNX3-201ENST00000308873 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.03
RUNX3-201ENST00000308873 HCRTO43612 131 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 FAM83AQ86UY5 434 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 FAM156AQ8NDB6 213 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ZSCAN18Q8TBC5 510 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 SEPT1Q8WYJ6 367 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ZNF669Q96BR6 464 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 HACL1Q9UJ83 578 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 A0A088AWK7 358 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 TCRBV5S1A1TA0A578 114 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ABLIM1O14639 778 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 KLHL2O95198 593 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 AMHP03971 560 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 VTNP04004 478 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 VCLP18206 1134 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 PDK3Q15120 406 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 GJC2Q5T442 439 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 FRMD7Q6ZUT3 714 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 NIPA2Q8N8Q9 360 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 TRAPPC9Q96Q05 1148 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 MINDY3Q9H8M7 445 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 COPS7BQ9H9Q2 264 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 USP29Q9HBJ7 922 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ANLNQ9NQW6 1124 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 TPH1P17752 444 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ABCD1P33897 745 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ARHGAP22Q7Z5H3 698 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 SPATA6LQ8N4H0 392 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 UBE2OQ9C0C9 1292 aaKnown RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 TMPRSS4Q9NRS4 437 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 KLHL8Q9P2G9 620 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 CDH22Q9UJ99 828 aa15.26■□□□□ 0.03
RUNX3-201ENST00000308873 CPSF3Q9UKF6 684 aaKnown RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 ZNF214Q9UL59 606 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-201ENST00000308873 FKBP6O75344 327 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 MT-CO1P00395 513 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 EPHA3P29320 983 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PMLP29590 882 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 ARL4AP40617 200 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 NUMBP49757 651 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 RAP1GDS1P52306 607 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 INHBEP58166 350 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 TMED1Q13445 227 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 SURF1Q15526 300 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 TRNP1Q6NT89 227 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PMF1Q6P1K2 205 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 ZPBP2Q6X784 338 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CDKL3Q8IVW4 592 aaPredicted RBP15.25■□□□□ 0.03
RUNX3-201ENST00000308873 DCLK2Q8N568 766 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 NLRP7Q8WX94 980 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CMTM5Q96DZ9 223 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PRPF18Q99633 342 aaKnown RBP15.25■□□□□ 0.03
RUNX3-201ENST00000308873 SPATA16Q9BXB7 569 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CDT1Q9H211 546 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 AS3MTQ9HBK9 375 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PCDHGC3Q9UN70 934 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PDCD2Q16342 344 aaPredicted RBP15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PAOXQ6QHF9 649 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 TMEM174Q8WUU8 243 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 TSNARE1Q96NA8 513 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CCDC106Q9BWC9 280 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 ADA2Q9NZK5 511 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 POMPQ9Y244 141 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 STYXL1Q9Y6J8 313 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CAPN14A8MX76 684 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 GPR25O00155 361 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 GPD2P43304 727 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CCR10P46092 362 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 IFRD2Q12894 506 aaPredicted RBP15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PDE1CQ14123 709 aaPredicted RBP15.25■□□□□ 0.03
RUNX3-201ENST00000308873 BOLA3Q53S33 107 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 CDRT15Q96T59 188 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 NT5C1AQ9BXI3 368 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 NUF2Q9BZD4 464 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 NFASCO94856 1347 aa15.25■□□□□ 0.03
RUNX3-201ENST00000308873 A0A087WZ62 844 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 F8W8V4 182 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 TBC1D12O60347 775 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 CPA3P15088 417 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 GOT1P17174 413 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 CDK7P50613 346 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 FOLH1Q04609 750 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
RUNX3-201ENST00000308873 ART3Q13508 389 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 FLOT2Q14254 428 aa15.24■□□□□ 0.03
RUNX3-201ENST00000308873 ACAP1Q15027 740 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms