RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 NEU2Q9Y3R4 380 aa13.31□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 GREB1Q4ZG55 1949 aa13.31□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 IRAK2O43187 625 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ZMYND10O75800 440 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 GAS8O95995 478 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 GLUD1P00367 558 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ITGAVP06756 1048 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CSH1P0DML2 217 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CSH2P0DML3 217 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 KCNJ1P48048 391 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PGFP49763 221 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TAF10Q12962 218 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TMCO3Q6UWJ1 677 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PLD5Q8N7P1 536 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CASKIN2Q8WXE0 1202 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ATG4AQ8WYN0 398 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MRPL38Q96DV4 380 aaKnown RBP13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 HAPLN3Q96S86 360 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 FAM129AQ9BZQ8 928 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ZNF576Q9H609 170 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 WDCPQ9H6R7 721 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 OSER1Q9NX31 292 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CWC15Q9P013 229 aaKnown RBP13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 GMIPQ9P107 970 aa13.3□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PRRG1O14668 218 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ELF1P32519 619 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ARL4AP40617 200 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 NR2C2P49116 596 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 DUSP6Q16828 381 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 GIPC2Q8TF65 315 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 AENQ8WTP8 325 aaKnown RBP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SERPINB11Q96P15 392 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CSPG4P5Q96PW8 444 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TTYH1Q9H313 450 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 DNPEPQ9ULA0 475 aa13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 H3BRJ5 948 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 APOL1O14791 398 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SLC2A3P11169 496 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 EPCAMP16422 314 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CCR1P32246 355 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 HTR7P34969 479 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PPP3CCP48454 512 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CARSP49589 748 aaKnown RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 OTUD4Q01804 1114 aaKnown RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TWF1Q12792 350 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 IFRD2Q12894 506 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SNX1Q13596 522 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PTK6Q13882 451 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 KCNC3Q14003 757 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 NOMO1Q15155 1222 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 EMBQ6PCB8 327 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 RTL10Q7L3V2 364 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CASP10Q92851 521 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SLC39A13Q96H72 371 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 SYNJ2BP-COX16A0A087WUM0 186 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 I6L893 689 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PER2O15055 1255 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PAPLNO95428 1278 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 C8AP07357 584 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MYBL2P10244 700 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 RARGP13631 454 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 STIP1P31948 543 aaKnown RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 NRG1Q02297 640 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 MTA1Q13330 715 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 XRCC4Q13426 336 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ACBD5Q5T8D3 534 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 KLHDC10Q6PID8 442 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CCDC149Q6ZUS6 474 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 PYROXD2Q8N2H3 581 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 ALLCQ8N6M5 410 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 P3H4Q92791 437 aa13.28□□□□□ -0.28
SHANK2-AS3-201ENST00000307548 CAVIN3Q969G5 261 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms