RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TUBB6Q9BUF5 446 aa13.98□□□□□ -0.17
CTTN-201ENST00000301843 CAB39LQ9H9S4 337 aa13.98□□□□□ -0.17
CTTN-201ENST00000301843 ANGPTL2Q9UKU9 493 aa13.98□□□□□ -0.17
CTTN-201ENST00000301843 MAGEA13PA6NCF6 341 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PDGFRBP09619 1106 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SPATA31D3P0C874 917 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 LCP1P13796 627 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SLC1A6P48664 564 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 RAB27AP51159 221 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 AP2B1P63010 937 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 TMEM62Q0P6H9 643 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 DLG1Q12959 904 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 CUL3Q13618 768 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
CTTN-201ENST00000301843 HIC1Q14526 733 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SPATA31D4Q6ZUB0 917 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 DEFB107AQ8IZN7 70 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SEPT1Q8WYJ6 367 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 IFT43Q96FT9 208 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 C7orf26Q96N11 449 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
CTTN-201ENST00000301843 PCDHGB4Q9UN71 923 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PCDHGB5Q9Y5G0 923 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SIP14410 1827 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 GABBR2O75899 941 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PGM3O95394 542 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 GSRP00390 522 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PFKMP08237 780 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 ADORA2BP29275 332 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 RAP1GDS1P52306 607 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 EFNA5P52803 228 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 TTC30AQ86WT1 665 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 MYLK4Q86YV6 388 aaPredicted RBP13.97□□□□□ -0.17
CTTN-201ENST00000301843 SULF1Q8IWU6 871 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 EBNA1BP2Q99848 306 aaKnown RBP13.97□□□□□ -0.17
CTTN-201ENST00000301843 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 PDGFCQ9NRA1 345 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 TMEM216Q9P0N5 145 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 HES2Q9Y543 173 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 LCTP09848 1927 aa13.97□□□□□ -0.17
CTTN-201ENST00000301843 SDC4P31431 198 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 CPOXP36551 454 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 HDAC4P56524 1084 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 LGSNQ5TDP6 509 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 FAM131BQ86XD5 332 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 GSDMBQ8TAX9 411 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 MARK4Q96L34 752 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 APOL2Q9BQE5 337 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 MRPL45Q9BRJ2 306 aaKnown RBP13.96□□□□□ -0.17
CTTN-201ENST00000301843 DPEP3Q9H4B8 488 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 A6NJR5 290 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 SDR42E2A6NKP2 422 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 SIN3BO75182 1162 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 GOT1P17174 413 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 PRKCHP24723 683 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 GSTT1P30711 240 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 PITX1P78337 314 aaPredicted RBP13.96□□□□□ -0.17
CTTN-201ENST00000301843 TRIP10Q15642 601 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 SPDYAQ5MJ70 313 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 FAM160B1Q5W0V3 765 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 NRDE2Q9H7Z3 1164 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
CTTN-201ENST00000301843 MAGEC1O60732 1142 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 FGF3P11487 239 aaPredicted RBP13.96□□□□□ -0.18
CTTN-201ENST00000301843 VAV1P15498 845 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 AP3M2P53677 418 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 ZRSR2Q15696 482 aaKnown RBP13.96□□□□□ -0.18
CTTN-201ENST00000301843 IER5Q5VY09 327 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 FRMD7Q6ZUT3 714 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 NET1Q7Z628 596 aaPredicted RBP13.96□□□□□ -0.18
CTTN-201ENST00000301843 CCNYQ8ND76 341 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 SLC16A10Q8TF71 515 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 SPATA33Q96N06 139 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 GCNAQ96QF7 691 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.18
CTTN-201ENST00000301843 XPNPEP3Q9NQH7 507 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 APOBEC2Q9Y235 224 aaKnown RBP13.96□□□□□ -0.18
CTTN-201ENST00000301843 NME7Q9Y5B8 376 aa13.96□□□□□ -0.18
CTTN-201ENST00000301843 IGKV6D-21A0A0A0MT36 114 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 ACKR2O00590 384 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 PAPSS1O43252 624 aaPredicted RBP13.95□□□□□ -0.18
CTTN-201ENST00000301843 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
CTTN-201ENST00000301843 AMHP03971 560 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 ICAM3P32942 547 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 RBBP5Q15291 538 aaKnown RBP13.95□□□□□ -0.18
CTTN-201ENST00000301843 SLC10A6Q3KNW5 377 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 RABGAP1LQ5R372 815 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 WDR75Q8IWA0 830 aaKnown RBP13.95□□□□□ -0.18
CTTN-201ENST00000301843 MAP7D3Q8IWC1 876 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 PLD6Q8N2A8 252 aaKnown RBP13.95□□□□□ -0.18
CTTN-201ENST00000301843 GALNT15Q8N3T1 639 aa13.95□□□□□ -0.18
CTTN-201ENST00000301843 PIWIL2Q8TC59 973 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms