RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TMPRSS6Q8IU80 811 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 CSPG4P5Q96PW8 444 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 GJD2Q9UKL4 321 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 EMCNQ9ULC0 261 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 PCDHA11Q9Y5I1 949 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 SPECC1L-ADORA2AF8WAN1 911 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 TSPAN1O60635 241 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 TNFAIP2Q03169 654 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 RALGPS1Q5JS13 557 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 THEMIS2Q5TEJ8 643 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 HIPK4Q8NE63 616 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 GSTCDQ8NEC7 633 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 SH3TC2Q8TF17 1288 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 CCDC106Q9BWC9 280 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 PNPOQ9NVS9 261 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 GSRP00390 522 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 C1orf146Q5VVC0 180 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 CDKL3Q8IVW4 592 aaPredicted RBP25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 HACE1Q8IYU2 909 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 AGR3Q8TD06 166 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 AFG1LQ8WV93 481 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 ZNF670Q9BS34 389 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 VRTNQ9H8Y1 702 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 STX18Q9P2W9 335 aaKnown RBP25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 TAGLN3Q9UI15 199 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 RPL26L1Q9UNX3 145 aaKnown RBP25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 A8MXQ7 604 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 USP12O75317 370 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 ZMPSTE24O75844 475 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 CRHR1P34998 444 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 MLH1P40692 756 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 AP1B1Q10567 949 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 TBCBQ99426 244 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 SLC4A5Q9BY07 1137 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 PPME1Q9Y570 386 aa25.16■■□□□ 1.62
SPTSSA-201ENST00000298130 ARHGAP42A6NI28 874 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ERVK-10P10266 1014 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ARRB2P32121 409 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 MAGEA3P43357 314 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 PDE1CQ14123 709 aaPredicted RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 PKDCCQ504Y2 493 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 CYP4F11Q9HBI6 524 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ITGA11Q9UKX5 1188 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 PPM1HQ9ULR3 514 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 PLA2G4CQ9UP65 541 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 CEP350Q5VT06 3117 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 LIN7AO14910 233 aaPredicted RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ADCY6O43306 1168 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 SNNO75324 88 aaPredicted RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 SP100P23497 879 aaPredicted RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 PGGT1BP53609 377 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 NCBP2-AS2Q69YL0 99 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 POTEAQ6S8J7 498 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 CMC1Q7Z7K0 106 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 TMEM110Q86TL2 294 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 CCNYQ8ND76 341 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 CCDC124Q96CT7 223 aaKnown RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 ANKRD27Q96NW4 1050 aa25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 EIF2AQ9BY44 585 aaKnown RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 FAM49AQ9H0Q0 323 aaPredicted RBP25.15■■□□□ 1.62
SPTSSA-201ENST00000298130 LOC100653049A0A140TA62 436 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 KRT34O76011 436 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 EPHB1P54762 984 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 SULF1Q8IWU6 871 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 EXOC8Q8IYI6 725 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 COLGALT1Q8NBJ5 622 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 AZIN2Q96A70 460 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 FAM149B1Q96BN6 582 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 AGAP3Q96P47 875 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 OXCT2Q9BYC2 517 aaPredicted RBP25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 KLK14Q9P0G3 267 aa25.14■■□□□ 1.62
SPTSSA-201ENST00000298130 PDE5AO76074 875 aa25.14■■□□□ 1.61
SPTSSA-201ENST00000298130 AKAP5P24588 427 aa25.14■■□□□ 1.61
SPTSSA-201ENST00000298130 TTLL4Q14679 1199 aa25.14■■□□□ 1.61
SPTSSA-201ENST00000298130 C10orf107Q8IVU9 208 aa25.14■■□□□ 1.61
SPTSSA-201ENST00000298130 XPNPEP3Q9NQH7 507 aa25.14■■□□□ 1.61
SPTSSA-201ENST00000298130 MDM4O15151 490 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 MFSD11O43934 449 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 GCATO75600 419 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 ZCCHC18P0CG32 403 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 MRPS35P82673 323 aaKnown RBP25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 MCUQ8NE86 351 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 TEKT4Q8WW24 435 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 HTR3CQ8WXA8 447 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 PYDC1Q8WXC3 89 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 PACSIN3Q9UKS6 424 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 PAPPA2Q9BXP8 1791 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 DPYSL4O14531 572 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 MAP3K7O43318 606 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 CREB3O43889 395 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 PDE1BQ01064 536 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 TRIM42Q8IWZ5 723 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 PPFIBP2Q8ND30 876 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 GOLGA2P5Q9HBQ8 144 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 MOCS1Q9NZB8 636 aa25.13■■□□□ 1.61
SPTSSA-201ENST00000298130 ANPEPP15144 967 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 CD1EP15812 388 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 SLC1A6P48664 564 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms