RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CEP295NLQ96MC4 621 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 ARFGAP3Q9NP61 516 aa25.61■■□□□ 1.69
SSBP4-201ENST00000270061 DPYSL4O14531 572 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 TRIM66O15016 1216 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 PSMA2P25787 234 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 DDX6P26196 483 aaKnown RBP eCLIP25.6■■□□□ 1.697e-7■■■□□ 19
SSBP4-201ENST00000270061 SCNN1AP37088 669 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 RGS7P49802 495 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 KLHL7Q8IXQ5 586 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 MRPS31Q92665 395 aaKnown RBP25.6■■□□□ 1.69
SSBP4-201ENST00000270061 SLC46A2Q9BY10 475 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 DUSP16Q9BY84 665 aa25.6■■□□□ 1.69
SSBP4-201ENST00000270061 COL4A3Q01955 1670 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 XPO1O14980 1071 aaKnown RBP25.59■■□□□ 1.69
SSBP4-201ENST00000270061 TNFRSF8P28908 595 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 WEE1P30291 646 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 PTPN5P54829 565 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 SLC6A3Q01959 620 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 DAB2IPQ5VWQ8 1189 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 OLFML1Q6UWY5 402 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 CCNI2Q6ZMN8 369 aaPredicted RBP25.59■■□□□ 1.69
SSBP4-201ENST00000270061 POLNQ7Z5Q5 900 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 YAF2Q8IY57 180 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 MAB21L3Q8N8X9 362 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 MAIP1Q8WWC4 291 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 RSPRY1Q96DX4 576 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.59■■□□□ 1.691e-7■■■■□ 22.5
SSBP4-201ENST00000270061 RAD51CO43502 376 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 GABBR2O75899 941 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 ZRANB2O95218 330 aaKnown RBP eCLIP25.59■■□□□ 1.691e-6■■■■□ 22.3
SSBP4-201ENST00000270061 ZNF143P52747 638 aaPredicted RBP25.59■■□□□ 1.69
SSBP4-201ENST00000270061 DENND5BQ6ZUT9 1274 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 PAQR9Q6ZVX9 377 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 CMTM8Q8IZV2 173 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 CCDC26Q8TAB7 109 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 HEBP1Q9NRV9 189 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 OBP2AQ9NY56 170 aa25.59■■□□□ 1.69
SSBP4-201ENST00000270061 COL4A2P08572 1712 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 C2CD4BA6NLJ0 364 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 GALR2O43603 387 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-201ENST00000270061 AVPR1AP37288 418 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 SLC8A3P57103 927 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 SLC7A5Q01650 507 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 FCHO2Q0JRZ9 810 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 CYP1B1Q16678 543 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 ARCQ7LC44 396 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 MAATS1Q7Z4T9 603 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 RCOR2Q8IZ40 523 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 B3GNT5Q9BYG0 378 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 DDX47Q9H0S4 455 aaKnown RBP25.58■■□□□ 1.69
SSBP4-201ENST00000270061 ZNF446Q9NWS9 450 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 DDX56Q9NY93 547 aaKnown RBP25.58■■□□□ 1.69
SSBP4-201ENST00000270061 SIT1Q9Y3P8 196 aa25.58■■□□□ 1.69
SSBP4-201ENST00000270061 KANSL1LA0AUZ9 987 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 SOBPA7XYQ1 873 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 CLDN5O00501 218 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 PAPSS1O43252 624 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-201ENST00000270061 ATP8B1O43520 1251 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 PRAMEF12O95522 483 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 SSR1P43307 286 aaKnown RBP25.57■■□□□ 1.68
SSBP4-201ENST00000270061 TCF15Q12870 199 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 SIX1Q15475 284 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-201ENST00000270061 BEND6Q5SZJ8 279 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-201ENST00000270061 TXNDC8Q6A555 127 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 EMC1Q8N766 993 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 PRELID2Q8N945 189 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 C8orf48Q96LL4 319 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 DDX23Q9BUQ8 820 aaKnown RBP25.57■■□□□ 1.68
SSBP4-201ENST00000270061 FOXQ1Q9C009 403 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 TRPV5Q9NQA5 729 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 GDF3Q9NR23 364 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 ASNSD1Q9NWL6 643 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 MYO15AQ9UKN7 3530 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 PIEZO1Q92508 2521 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 VPS13AQ96RL7 3174 aa25.57■■□□□ 1.68
SSBP4-201ENST00000270061 BHMG1C9JSJ3 638 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 GLI1P08151 1106 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 GPD1P21695 349 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 TPRG1Q6ZUI0 275 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 IFT20Q8IY31 132 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 ARFGAP1Q8N6T3 406 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 PJA1Q8NG27 643 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 KCTD13Q8WZ19 329 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 RBM41Q96IZ5 413 aaKnown RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 CNPY3Q9BT09 278 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 CACNA1IQ9P0X4 2223 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 KIF26AQ9ULI4 1882 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 CHADO15335 359 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 PHF2O75151 1096 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 LRCH4O75427 683 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 HEXIM1O94992 359 aaKnown RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 CHRNA3P32297 505 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 PCK1P35558 622 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 COPS2P61201 443 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 NHLH1Q02575 133 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 HADHQ16836 314 aaKnown RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 MAP9Q49MG5 647 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 MON1AQ86VX9 555 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 SCUBE3Q8IX30 993 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 CELF5Q8N6W0 485 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms