RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RNF112Q9ULX5 631 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 LTBP3Q9NS15 1303 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 LRRC37A3O60309 1634 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 TOPAZ1Q8N9V7 1692 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 TLL1O43897 1013 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ELK3P41970 407 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SERPINB8P50452 374 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 NOMO3P69849 1222 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ATP13A4Q4VNC1 1196 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 RAP1GAP2Q684P5 730 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 HTATIP2Q9BUP3 242 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SEMA4AQ9H3S1 761 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SHOC2Q9UQ13 582 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 DNALI1O14645 258 aaPredicted RBP14.09□□□□□ -0.15
NPC1-201ENST00000269228 EIF3HO15372 352 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■□□□ 11.5
NPC1-201ENST00000269228 GLRA3O75311 464 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 INHAP05111 366 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 PLA2G4AP47712 749 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ABCE1P61221 599 aaKnown RBP14.09□□□□□ -0.15
NPC1-201ENST00000269228 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 STARD3Q14849 445 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SPDYE7PQ495Y7 208 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 ARMC6Q6NXE6 501 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 SLC26A11Q86WA9 606 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 GPR152Q8TDT2 470 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 CDYLQ9Y232 598 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 CDY1Q9Y6F8 540 aa14.09□□□□□ -0.15
NPC1-201ENST00000269228 COL1A1P02452 1464 aaPredicted RBP14.08□□□□□ -0.15
NPC1-201ENST00000269228 RNF103-CHMP3A0A140T963 221 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 CYP1A2P05177 515 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 NPY5RQ15761 445 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 SLC24A5Q71RS6 500 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 SPATA16Q9BXB7 569 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 TRHDEQ9UKU6 1024 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 CNTNAP1P78357 1384 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 A0A0U1RQJ8 604 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 B4GALT4O60513 344 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 PYGBP11216 843 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ENO3P13929 434 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 OR1D2P34982 312 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 AP1ARQ63HQ0 302 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 TOP6BLQ8N6T0 577 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ASAH2Q9NR71 780 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 UBA2Q9UBT2 640 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 PCDHGC5Q9Y5F6 944 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 MYO1CO00159 1063 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 TSPAN1O60635 241 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 CSH1P0DML2 217 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 CSH2P0DML3 217 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 PECAM1P16284 738 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 DDX5P17844 614 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 PGM1P36871 562 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 RPL21P46778 160 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 MGAT5Q09328 741 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 DDX39BQ13838 428 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ERLEC1Q96DZ1 483 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ADAMTS3O15072 1205 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 LMNAP02545 664 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 APOA4P06727 396 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 ADH1AP07327 375 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 RPL7AP62424 266 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 SH3D19Q5HYK7 790 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 FAM35AQ86V20 835 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 SNRNP25Q9BV90 132 aaKnown RBP14.08□□□□□ -0.16
NPC1-201ENST00000269228 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 NID2Q14112 1375 aa14.08□□□□□ -0.16
NPC1-201ENST00000269228 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 CAND2O75155 1236 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 USP12O75317 370 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 ACADMP11310 421 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 MGAT1P26572 445 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 FOXR2Q6PJQ5 311 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 ERP27Q96DN0 273 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 EIF2AQ9BY44 585 aaKnown RBP14.07□□□□□ -0.16
NPC1-201ENST00000269228 GPAMQ9HCL2 828 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 CYP4F12Q9HCS2 524 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 DCDC2Q9UHG0 476 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 PPM1AP35813 382 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 OVGP1Q12889 678 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 PHF13Q86YI8 300 aaPredicted RBP14.07□□□□□ -0.16
NPC1-201ENST00000269228 HDAC7Q8WUI4 952 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 GMLQ99445 158 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 RUBCNLQ9H714 662 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 DERAQ9Y315 318 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 MRPS23Q9Y3D9 190 aaKnown RBP14.07□□□□□ -0.16
NPC1-201ENST00000269228 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
NPC1-201ENST00000269228 WDR27A2RRH5 827 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 GPR25O00155 361 aa14.07□□□□□ -0.16
NPC1-201ENST00000269228 DDHD2O94830 711 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms