RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 ATP9BO43861 1147 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 TGDSO95455 350 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 FESP07332 822 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 BPGMP07738 259 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 ARL4AP40617 200 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 SLC1A6P48664 564 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 RBP5P82980 135 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 NME3Q13232 169 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 LRRC23Q53EV4 343 aaPredicted RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 TSHZ1Q6ZSZ6 1077 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 CMC1Q7Z7K0 106 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 TRIM74Q86UV6 250 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 TRIM73Q86UV7 250 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 ANKRD27Q96NW4 1050 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 PANX3Q96QZ0 392 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 GPR20Q99678 358 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 EBNA1BP2Q99848 306 aaKnown RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 E9PBE3 544 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 KCNK1O00180 336 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 KLHL41O60662 606 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 CYP3A5P20815 502 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 MSX2P35548 267 aaPredicted RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 MRPL45Q9BRJ2 306 aaKnown RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 TLE6Q9H808 572 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 CSADQ9Y600 493 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 DGKIO75912 1065 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 GOT1P17174 413 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 ICAM3P32942 547 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 KRT72Q14CN4 511 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 PDK2Q15119 407 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 UNKQ9C0B0 810 aaKnown RBP13.04□□□□□ -0.32
LIG1-201ENST00000263274 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
LIG1-201ENST00000263274 PPEF2O14830 753 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 CCDC130P13994 396 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 DNAL1Q4LDG9 190 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 MFN1Q8IWA4 741 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 EPAS1Q99814 870 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 THAP1Q9NVV9 213 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 MAGEA13PA6NCF6 341 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 DCXO43602 365 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 HSPA4LO95757 839 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 IL4RP24394 825 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 DSG1Q02413 1049 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 SLC10A2Q12908 348 aaPredicted RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 TRIP10Q15642 601 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 C10orf107Q8IVU9 208 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 DEFB107AQ8IZN7 70 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 RNF148Q8N7C7 305 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 SMARCAD1Q9H4L7 1026 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 ZNF212Q9UDV6 495 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 SOX13Q9UN79 622 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 AIM2O14862 343 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 LIN7AO14910 233 aaPredicted RBP13.03□□□□□ -0.32
LIG1-201ENST00000263274 SLC6A3Q01959 620 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 MBTD1Q05BQ5 628 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 ADGRF2Q8IZF7 708 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 AZIN2Q96A70 460 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 BCO2Q9BYV7 579 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 FZD8Q9H461 694 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
LIG1-201ENST00000263274 TRDMT1O14717 391 aaKnown RBP13.02□□□□□ -0.32
LIG1-201ENST00000263274 PAPSS1O43252 624 aaPredicted RBP13.02□□□□□ -0.32
LIG1-201ENST00000263274 DNAJC6O75061 913 aa13.02□□□□□ -0.32
LIG1-201ENST00000263274 TM7SF2O76062 418 aa13.02□□□□□ -0.32
LIG1-201ENST00000263274 PGGT1BP53609 377 aa13.02□□□□□ -0.32
LIG1-201ENST00000263274 ACAP1Q15027 740 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms