RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEC23B-201ENST00000262544 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
SEC23B-201ENST00000262544 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
SEC23B-201ENST00000262544 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
SEC23B-201ENST00000262544 NUP205Q92621 2012 aa13.36□□□□□ -0.27
SEC23B-201ENST00000262544 SKIP12755 728 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 PSMB4P28070 264 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 CDH5P33151 784 aaPredicted RBP13.35□□□□□ -0.27
SEC23B-201ENST00000262544 AVPR1AP37288 418 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 SLC34A1Q06495 639 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 WASHC2DQ5SRD0 308 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 USP33Q8TEY7 942 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 MARK4Q96L34 752 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 TSC22D3Q99576 134 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
SEC23B-201ENST00000262544 SAR1AQ9NR31 198 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 ERAP1Q9NZ08 941 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 RPS6KL1Q9Y6S9 549 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 DNAJC6O75061 913 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
SEC23B-201ENST00000262544 NDUFV1P49821 464 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 HSF5Q4G112 596 aaPredicted RBP13.35□□□□□ -0.27
SEC23B-201ENST00000262544 LPCAT4Q643R3 524 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 APOBEC3FQ8IUX4 373 aaKnown RBP13.35□□□□□ -0.27
SEC23B-201ENST00000262544 ULK2Q8IYT8 1036 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 ADGRF2Q8IZF7 708 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 PNPLA1Q8N8W4 532 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 BCO2Q9BYV7 579 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 SLC7A8Q9UHI5 535 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 BPTFQ12830 3046 aa13.35□□□□□ -0.27
SEC23B-201ENST00000262544 CHADO15335 359 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 DCXO43602 365 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 FESP07332 822 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PFKMP08237 780 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 CCR10P46092 362 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 CCNG1P51959 295 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 BOLA3Q53S33 107 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SLC30A9Q6PML9 568 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PHC3Q8NDX5 983 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 GSDMBQ8TAX9 411 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 TBCBQ99426 244 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 HMX2A2RU54 273 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 HBP1O60381 514 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RARBP10826 455 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 GNAT1P11488 350 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 CD1EP15812 388 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 ARL4AP40617 200 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RAB27AP51159 221 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 CUL3Q13618 768 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 LENG1Q96BZ8 264 aaPredicted RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SCOCQ9UIL1 159 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 APOBEC2Q9Y235 224 aaKnown RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SNX10Q9Y5X0 201 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SCN1AP35498 2009 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 AHCYL1O43865 530 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 OPHN1O60890 802 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 IL18RAPO95256 599 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 LGALS2P05162 132 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 ETS2P15036 469 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 IGFBP6P24592 240 aaPredicted RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SERPINB5P36952 375 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SULT1E1P49888 294 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RAPH1Q70E73 1250 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.274e-6■■■□□ 16.3
SEC23B-201ENST00000262544 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 SGF29Q96ES7 293 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 ZNF333Q96JL9 665 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 PANX3Q96QZ0 392 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 EBNA1BP2Q99848 306 aaKnown RBP13.34□□□□□ -0.27
SEC23B-201ENST00000262544 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
SEC23B-201ENST00000262544 RNF103O00237 685 aa13.33□□□□□ -0.28
SEC23B-201ENST00000262544 AIM2O14862 343 aa13.33□□□□□ -0.28
SEC23B-201ENST00000262544 MFSD11O43934 449 aa13.33□□□□□ -0.28
SEC23B-201ENST00000262544 SLC1A6P48664 564 aa13.33□□□□□ -0.28
SEC23B-201ENST00000262544 ADIGQ0VDE8 80 aa13.33□□□□□ -0.28
SEC23B-201ENST00000262544 OLFML1Q6UWY5 402 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms