RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 PKN1Q16512 942 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 AP5B1Q2VPB7 878 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF772Q68DY9 489 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 MILR1Q7Z6M3 343 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 TPCN2Q8NHX9 752 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 COG5Q9UP83 839 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KLHL12Q53G59 568 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 RIBC1Q8N443 379 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 FBXO30Q8TB52 745 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 NEK7Q8TDX7 302 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 CNOT7Q9UIV1 285 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PLA2G4CQ9UP65 541 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 AFF2P51816 1311 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KHDRBS3O75525 346 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 SLC1A6P48664 564 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARF3P61204 181 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARF1P84077 181 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 EPB41L1Q9H4G0 881 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 SCAMP3O14828 347 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 SKIV2L2P42285 1042 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 STARP49675 285 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARMCX6Q7L4S7 300 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PLOD3O60568 738 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 CALB2P22676 271 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 SP100P23497 879 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 NPY2RP49146 381 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 BCAP31P51572 246 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 C16orf46Q6P387 395 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 CYP20A1Q6UW02 462 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 DET1Q7L5Y6 550 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 RMND5BQ96G75 393 aaPredicted RBP12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ABCB10Q9NRK6 738 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF518AQ6AHZ1 1483 aa12.74□□□□□ -0.37
ARFGEF1-201ENST00000262215 ATP6V1G2O95670 118 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CUL2Q13617 745 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ACOX1Q15067 660 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 RPTNQ6XPR3 784 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CHPFQ8IZ52 775 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 NUAK2Q9H093 628 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PIGUQ9H490 435 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 A1CFQ9NQ94 594 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ACOT9Q9Y305 439 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CKBP12277 381 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PYDC2Q56P42 97 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 MARK2Q7KZI7 788 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 DHFR2Q86XF0 187 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 AP4E1Q9UPM8 1137 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 SSU72P8A0A1W2PR75 194 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CCDC130P13994 396 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ABCG1P45844 678 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 MPP3Q13368 585 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 FASTKQ14296 549 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 C16orf59Q7L2K0 433 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 HIPK1Q86Z02 1210 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 BPIFB6Q8NFQ5 453 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 LRRC40Q9H9A6 602 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 FOXN3O00409 490 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PDE9AO76083 593 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF24P17028 368 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 N4BP2L1Q5TBK1 243 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 FAM171BQ6P995 826 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 UCMAQ8WVF2 138 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 MTSS1O43312 755 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 HNF4AP41235 474 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 RAPSNQ13702 412 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 ACSL4O60488 711 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 NOS1APO75052 506 aaPredicted RBP12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 MAGP20916 626 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 CLCN3P51790 818 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 MYBPC1Q00872 1141 aa12.73□□□□□ -0.37
ARFGEF1-201ENST00000262215 PDIA5Q14554 519 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms