RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CCT8P50990 548 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SEC23AQ15436 765 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 OASLQ15646 514 aaKnown RBP12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SLC39A12Q504Y0 691 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 KCNMB4Q86W47 210 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 PCSK9Q8NBP7 692 aaKnown RBP12.4□□□□□ -0.43
COL8A1-201ENST00000261037 TRPC4APQ8TEL6 797 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 USP6NLQ92738 828 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SLC5A5Q92911 643 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 CENPTQ96BT3 561 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 FAM120BQ96EK7 910 aaKnown RBP12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SH3BP4Q9P0V3 963 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 NUDT5Q9UKK9 219 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SOX13Q9UN79 622 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 PCDHB12Q9Y5F1 795 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 DDNO94850 711 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 RBP1P09455 135 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 TCEA2Q15560 299 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 EML3Q32P44 896 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 LGI2Q8N0V4 545 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 SENP6Q9GZR1 1112 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 BARX2Q9UMQ3 279 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 KLHL20Q9Y2M5 609 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 MEGF6O75095 1541 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 TSC22D2O75157 780 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 CCR1P32246 355 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ELK3P41970 407 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 CRYMQ14894 314 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ZBTB45Q96K62 511 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 TBL1YQ9BQ87 522 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 GAKO14976 1311 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 H0YC42 278 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 UBDO15205 165 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 MPOP05164 745 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 KPNA1P52294 538 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 CCNG2Q16589 344 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 USP39Q53GS9 565 aaKnown RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ATG16L2Q8NAA4 619 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ACTL9Q8TC94 416 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ATP13A1Q9HD20 1204 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 NAALADL1Q9UQQ1 740 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 FYNP06241 537 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 NFICP08651 508 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 SHMT1P34896 483 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 SOX6P35712 828 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 PLD1Q13393 1074 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
COL8A1-201ENST00000261037 MARC1Q5VT66 337 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 C3orf20Q8ND61 904 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
COL8A1-201ENST00000261037 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 IFRD1O00458 451 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 RIPK2O43353 540 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 USP17L7P0C7H9 530 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 TBCELQ5QJ74 424 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 GLT6D1Q7Z4J2 308 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 DEFB107AQ8IZN7 70 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ARRDC4Q8NCT1 418 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 KLHL4Q9C0H6 718 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 SEMA4AQ9H3S1 761 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 TSC22D4Q9Y3Q8 395 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 DYRK3O43781 588 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CALB2P22676 271 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 FMO4P31512 558 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 IL5RAQ01344 420 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 IZUMO2Q6UXV1 221 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 DEPDC7Q96QD5 511 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 KCNQ5Q9NR82 932 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 RGS18Q9NS28 235 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 TISP43B9A030 160 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 FAM20BO75063 409 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 PEX5P50542 639 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CORO7P57737 925 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 MGAT5Q09328 741 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 FAM228AQ86W67 206 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 SLC2A14Q8TDB8 520 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 A0A0A6YYK5 440 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 TPBGLP0DKB5 382 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 GZMAP12544 262 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ACADSP16219 412 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 RPL21P46778 160 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CSNK2BP67870 215 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 BEX3Q00994 111 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CXCL9Q07325 125 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms