RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LNX2Q8N448 690 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CPT1BQ92523 772 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 BIRC8Q96P09 236 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNK13Q9HB14 408 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GMEB2Q9UKD1 530 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SPATA31A6Q5VVP1 1343 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 A0A087WWV3 80 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 AP3D1O14617 1153 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 COX4I1P13073 169 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GSTM2P28161 218 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 HTR2BP41595 481 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 NSFP46459 744 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CCNG1P51959 295 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 NEDD8Q15843 81 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 BRDTQ58F21 947 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 C1QTNF1Q9BXJ1 281 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TOR3AQ9H497 397 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ARPP21Q9UBL0 812 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MKLN1Q9UL63 735 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CEMIPQ8WUJ3 1361 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TBC1D4O60343 1298 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PDE8BO95263 885 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SNRPAP09012 282 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 RARAP10276 462 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 AKAP5P24588 427 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 BAG6P46379 1132 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ILF3Q12906 894 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TRAF3Q13114 568 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PRKG2Q13237 762 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 QPRTQ15274 297 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ZFP1Q6P2D0 407 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PRPF39Q86UA1 669 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TSSK1BQ9BXA7 367 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 H3BM21 787 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MEN1O00255 615 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 POLR1CO15160 346 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 HSPA12AO43301 675 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ALX3O95076 343 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 INHBAP08476 426 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ALAS2P22557 587 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 KELP23276 732 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 RORAP35398 523 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 IL1RL1Q01638 556 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 INPP5AQ14642 412 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MTFR1Q15390 333 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 VARS2Q5ST30 1063 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF767PQ75MW2 155 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 AMIGO1Q86WK6 493 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ARMC8Q8IUR7 673 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 WDSUB1Q8N9V3 476 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF398Q8TD17 642 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PHF12Q96QT6 1004 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 AP4E1Q9UPM8 1137 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF185O15231 689 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CCNT1O60563 726 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CPNE3O75131 537 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RAG1P15918 1043 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 COPAP53621 1224 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SRP54P61011 504 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 MRPS22P82650 360 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CAV1Q03135 178 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 FGL2Q14314 439 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PXDC1Q5TGL8 231 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 NLGN1Q8N2Q7 840 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PNO1Q9NRX1 252 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 KBTBD4Q9NVX7 518 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ANGEL1Q9UNK9 670 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX24Q9Y343 169 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHA5Q9Y5H7 936 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RFX7Q2KHR2 1363 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ZMYM6O95789 1325 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 A0A0D9SFI3 127 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PSMD12O00232 456 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DAPK3O43293 454 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 OAZ2O95190 189 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DEXIO95424 95 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PROS1P07225 676 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CDK9P50750 372 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 NADK2Q4G0N4 442 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DPP10Q8N608 796 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TC2NQ8N9U0 490 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SLC35B4Q969S0 331 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DCLK3Q9C098 648 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RACGAP1Q9H0H5 632 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TP63Q9H3D4 680 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CHRAC1Q9NRG0 131 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 HEY2Q9UBP5 337 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TAGLN3Q9UI15 199 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 E7EWF7 191 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CDH16O75309 829 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PLS3P13797 630 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms