RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NETO2Q8NC67 525 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 TMEM169Q96HH4 297 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 SLC9A7Q96T83 725 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 YME1L1Q96TA2 773 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 TKTL2Q9H0I9 626 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 CENPHQ9H3R5 247 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 WDCPQ9H6R7 721 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 IL23AQ9NPF7 189 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 DNAJC17Q9NVM6 304 aaKnown RBP18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 GMIPQ9P107 970 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 SNX10Q9Y5X0 201 aa18.59■□□□□ 0.57
KLHDC3-201ENST00000244670 KIAA1671Q9BY89 1806 aa18.58■□□□□ 0.57
KLHDC3-201ENST00000244670 GOLGA6L10A6NI86 522 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 ZNF487B1APH4 448 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 HMGB1P1B2RPK0 211 aaPredicted RBP18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 DNALI1O14645 258 aaPredicted RBP18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 EFCAB14O75071 495 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 F9P00740 461 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 HAPLN1P10915 354 aaPredicted RBP18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 CXCR3P49682 368 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 GREB1Q4ZG55 1949 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 NCBP2-AS2Q69YL0 99 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 C16orf59Q7L2K0 433 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 COLGALT1Q8NBJ5 622 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 CASP10Q92851 521 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 NTAN1Q96AB6 310 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 TRIM62Q9BVG3 475 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 MCOLN1Q9GZU1 580 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 FBXO44Q9H4M3 255 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 PCDH9Q9HC56 1237 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 ARHGEF4Q9NR80 690 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 SCML2Q9UQR0 700 aa18.58■□□□□ 0.56
KLHDC3-201ENST00000244670 EEF2KO00418 725 aaKnown RBP18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 SOD2P04179 222 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 EIF3BP55884 814 aaKnown RBP18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 IFFO1Q0D2I5 559 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 SLC10A2Q12908 348 aaPredicted RBP18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 ARL13BQ3SXY8 428 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 KRT71Q3SY84 523 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 CMTR2Q8IYT2 770 aaKnown RBP18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 BBOF1Q8ND07 529 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 UHMK1Q8TAS1 419 aaKnown RBP18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 CCHCR1Q8TD31 782 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 GIPC2Q8TF65 315 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 H3BRJ5 948 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 BAIAP3O94812 1187 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 SCAPQ12770 1279 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 ZSCAN26Q16670 478 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 SLC8B1Q6J4K2 584 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 BADQ92934 168 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 FBXO32Q969P5 355 aa18.57■□□□□ 0.56
KLHDC3-201ENST00000244670 IRAK2O43187 625 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 IGLV3-25P01717 112 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 ZFXP17010 805 aaPredicted RBP18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 LAG3P18627 525 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 YWHAQP27348 245 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 AIF1P55008 147 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 SMARCB1Q12824 385 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 RFX8Q6ZV50 586 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 TRMT10CQ7L0Y3 403 aaKnown RBP18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 BEND5Q7L4P6 421 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 MON1AQ86VX9 555 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 AUTS2Q8WXX7 1259 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 CLSTN3Q9BQT9 956 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 OXCT2Q9BYC2 517 aaPredicted RBP18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 SMOC2Q9H3U7 446 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 RCOR3Q9P2K3 495 aaPredicted RBP18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 PRKAG2Q9UGJ0 569 aa18.56■□□□□ 0.56
KLHDC3-201ENST00000244670 MFSD11O43934 449 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 ATF6P18850 670 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 NR1D1P20393 614 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 DNAJB2P25686 324 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 RBL1P28749 1068 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 RPL22P35268 128 aaKnown RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 GLUD2P49448 558 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 AGBL2Q5U5Z8 902 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 UBE2Q1Q7Z7E8 422 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 C2orf15Q8WU43 125 aaKnown RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 DTLQ9NZJ0 730 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 MAGED2Q9UNF1 606 aaPredicted RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 BACE2Q9Y5Z0 518 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 KCNN4O15554 427 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 ATP1A2P50993 1020 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 HNRNPH2P55795 449 aaKnown RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 TPI1P60174 286 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 SKOR1P84550 965 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 TAF10Q12962 218 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 DPYSQ14117 519 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 RNASEH2BQ5TBB1 312 aaKnown RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 KDM7AQ6ZMT4 941 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 SPG21Q9NZD8 308 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 IL37Q9NZH6 218 aa18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 TPX2Q9ULW0 747 aaKnown RBP18.55■□□□□ 0.56
KLHDC3-201ENST00000244670 SHOX2O60902 331 aaPredicted RBP18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 RTN3O95197 1032 aaPredicted RBP18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 ACSL3O95573 720 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 DSG1Q02413 1049 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 SEMA3BQ13214 749 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 EIF4EBP2Q13542 120 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms