RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TSPAN16Q9UKR8 245 aa18.82■□□□□ 0.6
PFN1-201ENST00000225655 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
PFN1-201ENST00000225655 TNRC6BQ9UPQ9 1833 aaKnown RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 CNOT1A5YKK6 2376 aaKnown RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 XPO1O14980 1071 aaKnown RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 ZBED1O96006 694 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 PENKP01210 267 aaPredicted RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 CISD3P0C7P0 127 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 CHKAP35790 457 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 DGKGP49619 791 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 TKTL1P51854 596 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 ZNF132P52740 706 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 BCAT1P54687 386 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 PDE4CQ08493 712 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 EFEMP1Q12805 493 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 MAP7D1Q3KQU3 841 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 FIGNQ5HY92 759 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 SPDYCQ5MJ68 293 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 EGFLAMQ63HQ2 1017 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 SPECC1LQ69YQ0 1117 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 TOGARAM2Q6ZUX3 1019 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 RSRC2Q7L4I2 434 aaKnown RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 LPCAT2Q7L5N7 544 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 CYP2U1Q7Z449 544 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 PGBD3Q8N328 593 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 NUCKS1Q9H1E3 243 aaKnown RBP18.81■□□□□ 0.6
PFN1-201ENST00000225655 MARCH2Q9P0N8 246 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 FBXO10Q9UK96 956 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 STRIP2Q9ULQ0 834 aa18.81■□□□□ 0.6
PFN1-201ENST00000225655 A0A1W2PQF6 199 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 PRRT4C9JH25 899 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 FOXN3O00409 490 aaPredicted RBP18.8■□□□□ 0.6
PFN1-201ENST00000225655 MAP3K13O43283 966 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 HOXB2P14652 356 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 GNA15P30679 374 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 CORO1AP31146 461 aaKnown RBP18.8■□□□□ 0.6
PFN1-201ENST00000225655 SOX5P35711 763 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 DHPSP49366 369 aaPredicted RBP18.8■□□□□ 0.6
PFN1-201ENST00000225655 BST2Q10589 180 aaKnown RBP18.8■□□□□ 0.6
PFN1-201ENST00000225655 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 SDE2Q6IQ49 451 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 DPY19L2P1Q6NXN4 242 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 BHLHA9Q7RTU4 235 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 FAM71AQ8IYT1 594 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 CHPFQ8IZ52 775 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 GABRG3Q99928 467 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 ULBP1Q9BZM6 244 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 MBD1Q9UIS9 605 aaPredicted RBP18.8■□□□□ 0.6
PFN1-201ENST00000225655 SLC27A6Q9Y2P4 619 aa18.8■□□□□ 0.6
PFN1-201ENST00000225655 A0A1W2PQJ5 194 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 LNP1A1A4G5 178 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 TULP2O00295 520 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 O00370 1275 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 KHNYNO15037 678 aaKnown RBP18.79■□□□□ 0.6
PFN1-201ENST00000225655 EPHB6O15197 1021 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 THAP12O43422 761 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 GABRG2P18507 467 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 PBX1P40424 430 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 FRMD1Q8N878 549 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 BHMTQ93088 406 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 P2RY11Q96G91 374 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 ACOX2Q99424 681 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 EDEM2Q9BV94 578 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 PDCL3Q9H2J4 239 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 LRRC4Q9HBW1 653 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 CD248Q9HCU0 757 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 PLK2Q9NYY3 685 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 AJAP1Q9UKB5 411 aaPredicted RBP18.79■□□□□ 0.6
PFN1-201ENST00000225655 AGO1Q9UL18 857 aaKnown RBP18.79■□□□□ 0.6
PFN1-201ENST00000225655 CEP83Q9Y592 693 aa18.79■□□□□ 0.6
PFN1-201ENST00000225655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 GFRA2O00451 464 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 HMBSP08397 361 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 SETSIPP0DME0 302 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 FERP16591 822 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 KRT9P35527 623 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 WASP42768 502 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 JAM2P57087 298 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 ADIGQ0VDE8 80 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 CNGA2Q16280 664 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 PKDCCQ504Y2 493 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 FYB2Q5VWT5 728 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 FAM217AQ8IXS0 508 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 TMEFF1Q8IYR6 380 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 CPXM2Q8N436 756 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 KCTD13Q8WZ19 329 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 PIGKQ92643 395 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 PLD4Q96BZ4 506 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 MRFAP1L1Q96HT8 127 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 OLA1Q9NTK5 396 aaKnown RBP18.78■□□□□ 0.6
PFN1-201ENST00000225655 CALCOCO1Q9P1Z2 691 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 LUC7L2Q9Y383 392 aaKnown RBP18.78■□□□□ 0.6
PFN1-201ENST00000225655 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
PFN1-201ENST00000225655 SLC12A8A0AV02 714 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 RNF225M0QZC1 329 aaPredicted RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 ZBTB24O43167 697 aaPredicted RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 GFPT2O94808 682 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms