RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DERAQ9Y315 318 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 ASB3Q9Y575 518 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
SRP54-201ENST00000216774 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 GABBR2O75899 941 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 ANPEPP15144 967 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 KCTD2Q14681 263 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 LRRN4Q8WUT4 740 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
SRP54-201ENST00000216774 HTR3CQ8WXA8 447 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 SPATA13Q96N96 652 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 OLFM3Q96PB7 478 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 MRPL45Q9BRJ2 306 aaKnown RBP13.72□□□□□ -0.21
SRP54-201ENST00000216774 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 THTPAQ9BU02 230 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 R3HDMLQ9H3Y0 253 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 DTLQ9NZJ0 730 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 DLGAP2Q9P1A6 1054 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 DCDC2Q9UHG0 476 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 CSADQ9Y600 493 aa13.72□□□□□ -0.21
SRP54-201ENST00000216774 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 MAGEA13PA6NCF6 341 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 TSPAN1O60635 241 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 DGKIO75912 1065 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 KLHL2O95198 593 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 ALDOAP04075 364 aaKnown RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 FESP07332 822 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 CYP2C8P10632 490 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 CPOXP36551 454 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 GRM5P41594 1212 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 GRIA1P42261 906 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 MDH1BQ5I0G3 518 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 TMCO4Q5TGY1 634 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 C1orf146Q5VVC0 180 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 OR52E8Q6IFG1 317 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 LRRC8BQ6P9F7 803 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 UNC93AQ86WB7 457 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 MMP19Q99542 508 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 EBF4Q9BQW3 602 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 SPATS2LQ9NUQ6 558 aaKnown RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 FAM49BQ9NUQ9 324 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 EMCNQ9ULC0 261 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 COL1A2P08123 1366 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 KIF3CO14782 793 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 AHCYL1O43865 530 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PLIN3O60664 434 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 FKBP6O75344 327 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 FGF3P11487 239 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 MYL4P12829 197 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PGAM1P18669 254 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 GRK2P25098 689 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PEX19P40855 299 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 TUBB3Q13509 450 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 INSCQ1MX18 579 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 TEDDM1Q5T9Z0 273 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 N4BP2L1Q5TBK1 243 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 NCBP2-AS2Q69YL0 99 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PACS1Q6VY07 963 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 DENND5BQ6ZUT9 1274 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 ZNF483Q8TF39 744 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 GATA6Q92908 595 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
SRP54-201ENST00000216774 B3GNT5Q9BYG0 378 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 NDE1Q9NXR1 346 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 SNX9Q9Y5X1 595 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 USP3Q9Y6I4 520 aa13.71□□□□□ -0.21
SRP54-201ENST00000216774 PLXNA1Q9UIW2 1896 aa13.71□□□□□ -0.22
SRP54-201ENST00000216774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 OPHN1O60890 802 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 STK10O94804 968 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 SERPINE1P05121 402 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 CALRP27797 417 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 SLC1A6P48664 564 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 RPL34P49207 117 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 AAGABQ6PD74 315 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 ADGRG6Q86SQ4 1221 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 KBTBD2Q8IY47 623 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 IFT43Q96FT9 208 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 ZNF778Q96MU6 729 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 EVPLQ92817 2033 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 PAPPA2Q9BXP8 1791 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms