RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 MUC3BQ9H195 1237 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 SNX25Q9H3E2 840 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 ZNF576Q9H609 170 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 CNOT10Q9H9A5 744 aaKnown RBP6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 XPNPEP3Q9NQH7 507 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 TMEM51Q9NW97 253 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 RCOR3Q9P2K3 495 aaPredicted RBP6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 TJP2Q9UDY2 1190 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 ABT1Q9ULW3 272 aaKnown RBP6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 USP18Q9UMW8 372 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 GABRQQ9UN88 632 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 TRIM33Q9UPN9 1127 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 GINS2Q9Y248 185 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 R3HDM2Q9Y2K5 976 aaKnown RBP6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 ATP8A1Q9Y2Q0 1164 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 HES2Q9Y543 173 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 NME7Q9Y5B8 376 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 PTCH2Q9Y6C5 1203 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 SF3B1O75533 1304 aaKnown RBP eCLIP6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 VWA8A3KMH1 1905 aa6.68□□□□□ -1.34
TNFRSF17-201ENST00000053243 PAPSS1O43252 624 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RIPK2O43353 540 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PRPSAP2O60256 369 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 FBXO24O75426 580 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 DAB1O75553 588 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SMNDC1O75940 238 aaKnown RBP eCLIP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 FBXO21O94952 628 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TTC4O95801 387 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 AGTP01019 485 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CHRNA1P02708 482 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CYP11A1P05108 521 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 THP07101 528 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ASGR1P07306 291 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 IVLP07476 585 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TCF4P15884 667 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PDGFRAP16234 1089 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TSHRP16473 764 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 AKAP5P24588 427 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 IL1R2P27930 398 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 HOXD10P28358 340 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ATP5DP30049 168 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SDC4P31431 198 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 STIP1P31948 543 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 GNL1P36915 607 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SSR1P43307 286 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 KCNJ1P48048 391 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 LHX1P48742 406 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CDR1P51861 262 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ZNF135P52742 658 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ITGA8P53708 1063 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SLC8A3P57103 927 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ZNF200P98182 395 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SP3Q02447 781 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PRKCZQ05513 592 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 GRIK3Q13003 919 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CCDC142Q17RM4 750 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TRIM71Q2Q1W2 868 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 EFHC1Q5JVL4 640 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 GLRA4Q5JXX5 417 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 DAB2IPQ5VWQ8 1189 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 OR6B2Q6IFH4 312 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TRNP1Q6NT89 227 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PMF1Q6P1K2 205 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ELMSAN1Q6PJG2 1045 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CXCL17Q6UXB2 119 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 C20orf204Q6ZNR8 217 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ZNF771Q7L3S4 317 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ANKS1BQ7Z6G8 1248 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PHLDB2Q86SQ0 1253 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CNPY4Q8N129 248 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ZCCHC9Q8N567 271 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 B3GALNT2Q8NCR0 500 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 GSTCDQ8NEC7 633 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 UBA3Q8TBC4 463 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 NUDT8Q8WV74 236 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RXFP2Q8WXD0 754 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ATG4AQ8WYN0 398 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RSPH1Q8WYR4 309 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CENPTQ96BT3 561 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PGBD4Q96DM1 585 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RTP4Q96DX8 246 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CCDC114Q96M63 670 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SERPINB12Q96P63 405 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 DDX23Q9BUQ8 820 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 DUSP16Q9BY84 665 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 FRMD8Q9BZ67 464 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 TRIM31Q9BZY9 425 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CXCL16Q9H2A7 254 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 CDC42EP4Q9H3Q1 356 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 PLEKHA4Q9H4M7 779 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 SRA1Q9HD15 236 aaKnown RBP6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 RRN3Q9NYV6 651 aa6.67□□□□□ -1.34
TNFRSF17-201ENST00000053243 FETUBQ9UGM5 382 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms