RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Haus3Q8QZX2 570 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Brd8Q8R3B7 951 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tbrg4Q91YM4 630 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PigxQ99LV7 254 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gpatch1Q9DBM1 930 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 TriqkB2B9E1 86 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zfp358E9Q8M1 571 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Abhd12bG3UZN6 359 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rpl21O09167 160 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nek2O35942 443 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rpl22P67984 128 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Krt2Q3TTY5 707 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Arl13bQ640N2 427 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Kdm1bQ8CIG3 826 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Oas1cQ924S2 362 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Arhgef25Q9CWR0 618 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mup13L7N222 235 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tgm2P21981 686 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Grid2ipQ0QWG9 1203 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lipo3Q3UT41 399 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cyp2c66Q5GLZ0 490 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Scube3Q66PY1 993 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tas2r125Q7M710 311 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ankzf1Q80UU1 748 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Usp6nlQ80XC3 819 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cnot3Q8K0V4 751 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Abcf3Q8K268 709 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Hacd3Q8K2C9 362 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Eif3lQ8QZY1 564 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Wnt8bQ9WUD6 350 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cd44P15379 778 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Galnt3P70419 633 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tmem45aQ60774 273 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Bfsp2Q6NVD9 416 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 ScocQ78YZ6 125 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ddhd1Q80YA3 547 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rbm22Q8BHS3 420 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 MyocdQ8VIM5 935 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PllpQ9DCU2 182 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mgea5Q9EQQ9 916 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cnga3Q9JJZ8 631 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sfmbt1Q9JMD1 863 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 NfkbiaQ9Z1E3 314 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 WapP01173 134 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mcpt1P11034 246 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gas1Q01721 343 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tespa1Q3U132 458 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 P3h1Q3V1T4 739 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lcp1Q61233 627 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 March4Q80TE3 409 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Znf618Q80YY7 953 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Osbpl6Q8BXR9 959 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 NlnQ91YP2 704 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tas1r3Q925D8 858 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Trps1Q925H1 1281 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PdgfdQ925I7 370 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 CygbQ9CX80 190 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q9D2Q3 444 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Duoxa2Q9D311 320 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tmem115Q9WUH1 350 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Capn6O35646 641 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Il1aP01582 270 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 HdcP23738 662 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gp1bbP56400 206 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cyp2c39P56656 490 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Morf4l1P60762 362 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 SPINDOCQ05AH6 381 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 TraddQ3U0V2 310 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 GpamQ61586 827 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tas2r131Q7M708 310 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nup93Q8BJ71 819 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Abraxas1Q8BPZ8 407 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nox1Q8CIZ9 591 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Onecut3Q8K557 490 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mgat5Q8R4G6 740 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Snrnp25Q8VIK1 123 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Haus8Q99L00 373 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mrpl9Q99N94 265 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sgf29Q9DA08 293 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Prl2b1Q9DAZ2 228 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PotegA5H0M4 473 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Skint6A7XUZ6 1240 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pnldc1B2RXZ1 531 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm4302E9PX25 294 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 R3hdm1E9Q9Q2 1135 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tekt5G5E8A8 557 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 AaasP58742 546 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Itga11P61622 1188 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Srebf2Q3U1N2 1130 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Hsdl1Q8BTX9 330 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Usp20Q8C6M1 916 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rbmx2Q8R0F5 326 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Spon1Q8VCC9 807 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Glis2Q8VDL9 521 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lrrc40Q9CRC8 602 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Acsl4Q9QUJ7 711 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tagln3Q9R1Q8 199 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cul9Q80TT8 1865 aa10.56□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Disp2Q8CIP5 1345 aa10.55□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cntnap2Q9CPW0 1332 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms