RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Zfp946F6VWU8 523 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Barx2O08686 283 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 ZfrO88532 1074 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 IapP03975 557 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Aqp4P55088 323 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dlg3P70175 849 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ak8Q32M07 479 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rbm44Q3V089 1013 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Caprin1Q60865 707 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ppm1lQ8BHN0 360 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trim7Q923T7 510 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gstt4Q9D4P7 240 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 PllpQ9DCU2 182 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 TfgQ9Z1A1 397 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Heg1E9Q7X6 1337 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 TazI7HJS2 263 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Klc2O88448 599 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Csf1rP09581 977 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 ItkQ03526 625 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rcsd1Q3UZA1 412 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sel1l3Q80TS8 1137 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ccdc184Q8BMK5 191 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp62Q8C827 914 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zcchc18Q8VD24 393 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 MtrexQ9CZU3 1040 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tbx20Q9ES03 445 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ccdc120A2AEV7 629 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trim5E9PV98 497 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gm3402K7N5P2 326 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cd70O55237 195 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abce1P61222 599 aaKnown RBP11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 RenbpP82343 430 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ptchd3Q0EEE2 906 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Itih1Q61702 907 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 IqceQ6PCQ0 778 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp759Q7M6X3 721 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gabra5Q8BHJ7 463 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pak5Q8C015 719 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Angel2Q8K1C0 544 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cdyl2Q9D5D8 503 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mageb2A2AHM0 380 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Svs3aF2Z472 265 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Glb1P23780 647 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Irf6P97431 467 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Agap2Q3UHD9 1186 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fam129aQ3UW53 926 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Clhc1Q5M6W3 596 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lsm8Q6ZWM4 96 aaKnown RBP11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Washc5Q8C2E7 1159 aaKnown RBP11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mettl24Q8CCB5 363 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ugp2Q91ZJ5 508 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 St7Q99M96 577 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ifi30Q9ESY9 248 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Bace2Q9JL18 514 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmem115Q9WUH1 350 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nr2c2P49117 596 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fdft1P53798 416 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cdh5P55284 784 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lrfn1Q2WF71 766 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gngt2Q61017 69 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Syn2Q64332 586 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ptk7Q8BKG3 1062 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 BoraQ8BS90 525 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lrrc19Q8BZT5 364 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmc7Q8C428 726 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Vmn1r199Q8R280 367 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rps6kl1Q8R2S1 544 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ppp6r2Q8R3Q2 923 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Myoz3Q8R4E4 245 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pcdhb10Q91VE5 797 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Commd8Q9CZG3 183 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Polr3eQ9CZT4 710 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rgs3Q9DC04 966 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dcaf6Q9DC22 876 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Med20Q9R0X0 212 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cib1Q9Z0F4 191 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nrxn3Q6P9K9 1571 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pramef17A2ASJ1 475 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Osbpl8B9EJ86 889 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tff2Q03404 129 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abi3bpQ59IW6 1179 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fbxw2Q60584 422 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tgoln2Q62314 363 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 DcstampQ7TNJ0 470 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mcph1Q7TT79 822 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ppp4r1Q8K2V1 951 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nrbf2Q8VCQ3 287 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 CoprsQ9CQ13 173 aa11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mrpl57Q9CQF8 102 aaKnown RBP11.62□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Phf11A6H5X4 337 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Farp1F8VPU2 1048 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nedd8P29595 81 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Stx1bP61264 288 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tbx3P70324 741 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gprin1Q3UNH4 932 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pld5Q3UNN8 536 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lgr6Q3UVD5 967 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc9c1Q6UJY2 1175 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 StgQ8BM15 349 aa11.61□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc44a2Q8BY89 706 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms