RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Psd3Q2PFD7 1037 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Fam129aQ3UW53 926 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Capn13Q3UW68 665 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Scara3Q8C850 606 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Gsdmc3Q8CB12 480 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Fam151aQ8QZW3 608 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 Ifi202Q9R002 445 aa14.77□□□□□ -0.04
Col7a1-201ENSMUST00000026740 AV320801A2AWL3 467 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 PtproE9Q612 1226 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 2610008E11RikG3X964 669 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Gm15023L7MUB4 467 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 CrtamQ149L7 389 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Abi3Q8BYZ1 367 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Uxs1Q91XL3 420 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Scrn1Q9CZC8 414 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Grik3B1AS29 919 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Copz1P61924 177 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Arhgef38Q80VK6 770 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Pcmtd2Q8BHD8 359 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 CkbQ04447 381 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Fnip1Q68FD7 1165 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Smtnl2Q8CI12 456 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Znf608Q56A10 1511 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tsc22d2E9Q7M2 769 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Fkbp1aP26883 108 aaKnown RBP14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Taf13P61216 124 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Fam126aQ6P9N1 521 aa14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 R3hdm2Q80TM6 1044 aaKnown RBP14.77□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Gpatch4Q3TFK5 415 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Psen2Q61144 448 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Fam149b1Q6NSV7 578 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Efr3bQ6ZQ18 817 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tmco6Q8BQX5 494 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tldc1Q8K0P3 455 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Dapk2Q8VDF3 370 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Creld1Q91XD7 420 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Mis18aQ9CZJ6 204 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Lrrc71Q9D3W5 558 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 MndalD0QMC3 538 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Rad54lP70270 747 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Nr6a1Q64249 495 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 C1qtnf7Q8BVD7 289 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Actr8Q8R2S9 624 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Dnajc9Q91WN1 259 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Atf6F6VAN0 656 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Bcat1P24288 386 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 E2f4Q8R0K9 410 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Znf687Q9D2D7 1237 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Mapk9Q9WTU6 423 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 XdhQ00519 1335 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 GclmO09172 274 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Fkbp8O35465 402 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 RykQ01887 594 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Grid2ipQ0QWG9 1203 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Rbm20Q3UQS8 1199 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Pdzph1Q8BGR1 1238 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Klra17Q9JMA4 273 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Trit1Q80UN9 467 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Unc5bQ8K1S3 945 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 GaleQ8R059 347 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tsen15Q8R3W5 168 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Kcnt2D3Z649 1135 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 1700001J03RikQ80ZR8 219 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Map10Q8BJS7 891 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tmem154Q8C4Q9 181 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Ssh3Q8K330 649 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 IlkapQ8R0F6 392 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Reep2Q8VCD6 254 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 EloblA6PWE0 161 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 CtifQ6PEE2 600 aaKnown RBP14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 St7Q99M96 577 aa14.76□□□□□ -0.05
Col7a1-201ENSMUST00000026740 SptbP15508 2128 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Smim22J3QP37 91 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Vmn2r77L7N2B7 854 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Klf6O08584 283 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 MyocO70624 490 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Sel1l2Q3V172 688 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Mrgprb8Q7TN51 330 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 GmppbQ8BTZ7 360 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tbrg4Q91YM4 630 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Sf3b3Q921M3 1217 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Polr3hQ9D2C6 204 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Cyp2c23E9Q5K4 494 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Grem2O88273 168 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Mmp13P33435 472 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Hnrnph2P70333 449 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Cdca2Q14B71 982 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Zfp868Q3UTQ6 422 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Raver2Q7TPD6 673 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Rsbn1Q80T69 795 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tbc1d10cQ8C9V1 444 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Cyp2c70Q91W64 489 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Ribc2Q9D4Q1 309 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Nr2c2P49117 596 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Smyd1P97443 490 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Tnni3kQ5GIG6 834 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 4931406P16RikQ8C5X1 1059 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Wdr11Q8K1X1 1223 aa14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Ddx47Q9CWX9 455 aaKnown RBP14.75□□□□□ -0.05
Col7a1-201ENSMUST00000026740 Uchl3Q9JKB1 230 aa14.75□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms