RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 S100pbpQ9D5K4 396 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Smad9Q9JIW5 430 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 C1qtnf1Q9QXP7 281 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Atp11cQ9QZW0 1129 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pgap3A2A559 320 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Srpk1O70551 648 aaKnown RBP11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 GaaP70699 953 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ptcd3Q14C51 685 aaKnown RBP11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sh2d1b2Q45HK4 132 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gcnt3Q5JCT0 437 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dpysl3Q62188 570 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Olfr1057Q7TR75 315 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ticam2Q8BJQ4 232 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ftsj1Q8CBC7 324 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 TwnkQ8CIW5 685 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dach2Q925Q8 634 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tmem81Q9D5K1 259 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pds5aQ6A026 1332 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cyp2b23E9Q593 491 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Impa1O55023 277 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gsta3P30115 221 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 PtpreP49446 699 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Shmt1P50431 478 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 LipeP54310 759 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Agap2Q3UHD9 1186 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ankrd34bQ3UUF8 508 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rhbdf1Q6PIX5 856 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 E2f7Q6S7F2 904 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Agbl2Q8CDK2 862 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Zfp263Q8CF60 680 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Aldh4a1Q8CHT0 562 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tmco1Q921L3 188 aaKnown RBP11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 GsdmcQ99NB5 468 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 IcmtQ9EQK7 283 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Anxa9Q9JHQ0 345 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ppp2r3cQ9JK24 453 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mpp2Q9WV34 552 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Bmpr2O35607 1038 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cdk7Q03147 346 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Wdr18Q4VBE8 431 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 SpdyaQ5IBH7 310 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nlgn2Q69ZK9 836 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Zdhhc19Q810M5 347 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tmem169Q8BG50 297 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Stk32aQ8BGW6 398 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Orai2Q8BH10 250 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gtse1Q8R080 741 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gstm4Q8R5I6 218 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mettl16Q9CQG2 553 aaKnown RBP11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Taf7lQ9D3R9 471 aa11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Maged1Q9QYH6 775 aaKnown RBP11.17□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm281D3Z1Y0 860 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Prim2P33610 505 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Brcc3P46737 291 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ndrg1Q62433 394 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ubxn7Q6P5G6 467 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Lsm8Q6ZWM4 96 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cspg5Q71M36 566 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 SowahaQ8BLS7 548 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Unc93b1Q8VCW4 598 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Spns2Q91VM4 549 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tfap2dQ91ZK0 452 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Polr3hQ9D2C6 204 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fam227aQ9D3V8 625 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tmem59Q9QY73 323 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cyp4a12bA2A974 508 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Acnat1A2AKK5 416 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pias1O88907 651 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 LgmnO89017 435 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 GfapP03995 430 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tulp2P46686 562 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gpc4P51655 557 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 PolgP54099 1218 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Foxp2P58463 714 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trim71Q1PSW8 855 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nfe2l2Q60795 597 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 PimregQ8BFY7 231 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Appl1Q8K3H0 707 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dync1li1Q8R1Q8 523 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dhx36Q8VHK9 1001 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cyp4a12aQ91WL5 508 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pih1d1Q9CQJ2 290 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nudt8Q9CR24 210 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fip1l1Q9D824 581 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ing2Q9ESK4 281 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nhsl1Q8CAF4 1587 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Wfdc16A2A5H4 111 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3173A6NAS3 172 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Slc4a9E9PUP3 929 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3020E9Q3J7 150 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm2897K7N6T7 172 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ebf3O08791 596 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Adam15O88839 864 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Elk4P41158 430 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tac1P41539 130 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Irf3P70671 419 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Polr1bP70700 1135 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sdr16c6Q05A13 316 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Arhgap45Q3TBD2 1116 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Klhl23Q6GQU2 558 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms