RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MED7O43513 233 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ATP2C2O75185 946 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 AGR2O95994 175 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CYP1A1P04798 512 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 GZMAP12544 262 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 PTPN1P18031 435 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 NME2P22392 152 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 FGFR3P22607 806 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LRRC14Q15048 493 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 SHHQ15465 462 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CNGA2Q16280 664 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CLEC16AQ2KHT3 1053 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CCDC122Q5T0U0 273 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ARHGAP17Q68EM7 881 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LCLAT1Q6UWP7 414 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TRIM72Q6ZMU5 477 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 MAATS1Q7Z4T9 603 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CCAR2Q8N163 923 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 THEM5Q8N1Q8 247 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 FIBCD1Q8N539 461 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 OR10T2Q8NGX3 314 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LRGUKQ96M69 825 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 SERINC2Q96SA4 455 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 SYT15Q9BQS2 421 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ACBD6Q9BR61 282 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 VN1R3Q9BXE9 311 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 GRIP2Q9C0E4 1043 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 BHLHE41Q9C0J9 482 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 KCND1Q9NSA2 647 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 FAM49BQ9NUQ9 324 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 SPG21Q9NZD8 308 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CDH9Q9ULB4 789 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 PCDHGB3Q9Y5G1 929 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 PCDHA13Q9Y5I0 950 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 A0A0U1RQJ8 604 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LCHNA4D1U4 455 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TMCO5BA8MYB1 307 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ZSCAN12O43309 604 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LSM8O95777 96 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 UNGP13051 313 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 NME1P15531 152 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CDH5P33151 784 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 MAGEA1P43355 309 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 VAV2P52735 878 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 NOMO3P69849 1222 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 STILQ15468 1287 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CCDC142Q17RM4 750 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 C10orf76Q5T2E6 689 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 NAA35Q5VZE5 725 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LLGL2Q6P1M3 1020 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 DENND1BQ6P3S1 775 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TAS1R1Q7RTX1 841 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CEP57Q86XR8 500 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ATRIPQ8WXE1 791 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 CYFIP2Q96F07 1278 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TMEM169Q96HH4 297 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TBATAQ96M53 351 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 GDF15Q99988 308 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LACRTQ9GZZ8 138 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 ISCUQ9H1K1 167 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 LHX5Q9H2C1 402 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TRMT1Q9NXH9 659 aaKnown RBP8.37□□□□□ -1.07
SCARB2-220ENST00000640076 NDOR1Q9UHB4 597 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TSPAN16Q9UKR8 245 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 TFR2Q9UP52 801 aa8.37□□□□□ -1.07
SCARB2-220ENST00000640076 MYH10P35580 1976 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 A0A1W2PRQ8 180 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 FAM170AA1A519 330 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 MYBPHLA2RUH7 354 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 H0YGN5 161 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 M0QYV0 167 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 RTN2O75298 545 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 HTR3BO95264 441 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 FTLP02792 175 aaPredicted RBP8.36□□□□□ -1.07
SCARB2-220ENST00000640076 CCDC130P13994 396 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PPM1AP35813 382 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 IGFALSP35858 605 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 SCNN1BP51168 640 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 ZNF143P52747 638 aaPredicted RBP8.36□□□□□ -1.07
SCARB2-220ENST00000640076 RABGGTBP53611 331 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 ERVK-21P61565 698 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 MDH1BQ5I0G3 518 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 RTP2Q5QGT7 225 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 ACAD10Q6JQN1 1059 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 FAM171BQ6P995 826 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 CHST15Q7LFX5 561 aaPredicted RBP8.36□□□□□ -1.07
SCARB2-220ENST00000640076 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 TTC30AQ86WT1 665 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 REXO1L1PQ8IX06 675 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms