RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 BSPRYQ5W0U4 402 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 LCLAT1Q6UWP7 414 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 SLC36A4Q6YBV0 504 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 SYT12Q8IV01 421 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 FMNL3Q8IVF7 1028 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 RNF139Q8WU17 664 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 KCTD13Q8WZ19 329 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 TMEM9BQ9NQ34 198 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 RAD54BQ9Y620 910 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 MAP1BP46821 2468 aaKnown RBP21■□□□□ 0.95
CLN6-222ENST00000637667 BICDL2A1A5D9 508 aa21■□□□□ 0.95
CLN6-222ENST00000637667 YJEFN3A6XGL0 299 aa21■□□□□ 0.95
CLN6-222ENST00000637667 E7ENQ6 273 aa21■□□□□ 0.95
CLN6-222ENST00000637667 P4HA2O15460 535 aa21■□□□□ 0.95
CLN6-222ENST00000637667 AP5Z1O43299 807 aa21■□□□□ 0.95
CLN6-222ENST00000637667 ZNF217O75362 1048 aa21■□□□□ 0.95
CLN6-222ENST00000637667 KCNK5O95279 499 aa21■□□□□ 0.95
CLN6-222ENST00000637667 DPP6P42658 865 aa21■□□□□ 0.95
CLN6-222ENST00000637667 RPL6Q02878 288 aaKnown RBP21■□□□□ 0.95
CLN6-222ENST00000637667 MORC3Q14149 939 aa21■□□□□ 0.95
CLN6-222ENST00000637667 GEN1Q17RS7 908 aa21■□□□□ 0.95
CLN6-222ENST00000637667 TRIM61Q5EBN2 209 aa21■□□□□ 0.95
CLN6-222ENST00000637667 DAB2IPQ5VWQ8 1189 aa21■□□□□ 0.95
CLN6-222ENST00000637667 FAM217AQ8IXS0 508 aa21■□□□□ 0.95
CLN6-222ENST00000637667 PPM1KQ8N3J5 372 aa21■□□□□ 0.95
CLN6-222ENST00000637667 LMO3Q8TAP4 145 aa21■□□□□ 0.95
CLN6-222ENST00000637667 EDEM1Q92611 657 aa21■□□□□ 0.95
CLN6-222ENST00000637667 KAT5Q92993 513 aa21■□□□□ 0.95
CLN6-222ENST00000637667 CNGB3Q9NQW8 809 aa21■□□□□ 0.95
CLN6-222ENST00000637667 TMEM74BQ9NUR3 256 aa21■□□□□ 0.95
CLN6-222ENST00000637667 CTNND2Q9UQB3 1225 aa21■□□□□ 0.95
CLN6-222ENST00000637667 HBS1LQ9Y450 684 aaKnown RBP21■□□□□ 0.95
CLN6-222ENST00000637667 STON1Q9Y6Q2 735 aa21■□□□□ 0.95
CLN6-222ENST00000637667 IGHV1OR15-9A0A0B4J2B8 117 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 WASH3PC4AMC7 463 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 BIN1O00499 593 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 CDX4O14627 284 aaPredicted RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 GADD45BO75293 160 aaPredicted RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 ITPKAP23677 461 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 HARS2P49590 506 aaKnown RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 CNGA2Q16280 664 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 ANKS1BQ7Z6G8 1248 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 SCML4Q8N228 414 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 UCMAQ8WVF2 138 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 PIWIL1Q96J94 861 aaKnown RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 MRGPRX1Q96LB2 322 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 ZSWIM1Q9BR11 485 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 NUSAP1Q9BXS6 441 aaKnown RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 THAP10Q9P2Z0 257 aaPredicted RBP20.99■□□□□ 0.95
CLN6-222ENST00000637667 SFMBT1Q9UHJ3 866 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 PILRBQ9UKJ0 227 aa20.99■□□□□ 0.95
CLN6-222ENST00000637667 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLN6-222ENST00000637667 PLXND1Q9Y4D7 1925 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 PI4KAP42356 2102 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 RNF225M0QZC1 329 aaPredicted RBP20.98■□□□□ 0.95
CLN6-222ENST00000637667 NPC1O15118 1278 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 LCP1P13796 627 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 BRD2P25440 801 aaKnown RBP20.98■□□□□ 0.95
CLN6-222ENST00000637667 HOXD12P35452 270 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 RGS7P49802 495 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 DAOAP59103 153 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 LMAN2Q12907 356 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 STARD3Q14849 445 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 DEFB119Q8N690 84 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 DDI1Q8WTU0 396 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 SLC35F5Q8WV83 523 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 SLC2A11Q9BYW1 496 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 SLC6A17Q9H1V8 727 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 ABCC13Q9NSE7 274 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 CLEC4EQ9ULY5 219 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 CYP8B1Q9UNU6 501 aa20.98■□□□□ 0.95
CLN6-222ENST00000637667 ATXN2Q99700 1313 aaKnown RBP20.98■□□□□ 0.95
CLN6-222ENST00000637667 CACNA1EQ15878 2313 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 M0QYV0 167 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 GABBR2O75899 941 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 GNA14O95837 355 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 PMLP29590 882 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 NOVA1P51513 510 aaKnown RBP20.97■□□□□ 0.95
CLN6-222ENST00000637667 STX17P56962 302 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 PAK1Q13153 545 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 STILQ15468 1287 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 PEAR1Q5VY43 1037 aaPredicted RBP20.97■□□□□ 0.95
CLN6-222ENST00000637667 PSAPL1Q6NUJ1 521 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 PMF1Q6P1K2 205 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 KIAA1324Q6UXG2 1013 aaKnown RBP20.97■□□□□ 0.95
CLN6-222ENST00000637667 RRAGAQ7L523 313 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 ARHGEF19Q8IW93 802 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 TRIM59Q8IWR1 403 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 RBBP8NLQ8NC74 664 aaPredicted RBP20.97■□□□□ 0.95
CLN6-222ENST00000637667 ELOVL2Q9NXB9 296 aa20.97■□□□□ 0.95
CLN6-222ENST00000637667 ASCC3Q8N3C0 2202 aaKnown RBP20.97■□□□□ 0.95
CLN6-222ENST00000637667 MSI1O43347 362 aaKnown RBP20.96■□□□□ 0.95
CLN6-222ENST00000637667 CALCAP01258 141 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 IL12RB1P42701 662 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 ZNF132P52740 706 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 GCNT1Q02742 428 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 ZNF33AQ06730 810 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 KCNH2Q12809 1159 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 ENPP2Q13822 863 aa20.96■□□□□ 0.95
CLN6-222ENST00000637667 EIF4HQ15056 248 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms