RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 TRIM9Q9C026 710 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 TRPC4Q9UBN4 977 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 MAGEB16A2A368 324 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 LRRC14BA6NHZ5 514 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 FAM20BO75063 409 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 TSPAN19P0C672 248 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 CYP2A7P20853 494 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 HK2P52789 917 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 RHAGQ02094 409 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 DENND5BQ6ZUT9 1274 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 CCDC185Q8N715 623 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 MS4A14Q96JA4 679 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 LDHDQ86WU2 507 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 CHPFQ8IZ52 775 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 NYAP2Q9P242 653 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 PLA2G4CQ9UP65 541 aa13.52□□□□□ -0.24
SYNGAP1-208ENST00000629380 SHROOM3Q8TF72 1996 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 BTN3A3O00478 584 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 PMPCBO75439 489 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 PCSK9Q8NBP7 692 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 UXS1Q8NBZ7 420 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 PJA1Q8NG27 643 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 BSNDQ8WZ55 320 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 ALDH8A1Q9H2A2 487 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 UBE2QL1A1L167 161 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 LSM8O95777 96 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 FUT11Q495W5 492 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 RORBQ92753 470 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 HAVCR1Q96D42 359 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 BCLAF3A2AJT9 711 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 RGS7P49802 495 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 MYBPC2Q14324 1141 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZNF671Q8TAW3 534 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 USP33Q8TEY7 942 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 TRAPPC9Q96Q05 1148 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 DAGLAQ9Y4D2 1042 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 PDGFRBP09619 1106 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 AVPR1AP37288 418 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 STARD3Q14849 445 aa13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 UTP15Q8TED0 518 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-208ENST00000629380 HS6ST1O60243 411 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 BCAT1P54687 386 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZBTB49Q6ZSB9 765 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 KIF2BQ8N4N8 673 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 KPNA6O60684 536 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 MPOP05164 745 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 MYL4P12829 197 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 GPAT2Q6NUI2 795 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 USP7Q93009 1102 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 GBA2Q9HCG7 927 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ANAPC2Q9UJX6 822 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 DBR1Q9UK59 544 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 HMBSP08397 361 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 GYS1P13807 737 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 NPR3P17342 541 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 SOX11P35716 441 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 EPHA7Q15375 998 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 MGAT5BQ3V5L5 792 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCDC33Q8N5R6 958 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 Q96MT0 163 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 FKBP14Q9NWM8 211 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 THG1LQ9NWX6 298 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 GLP2RO95838 553 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 NR3C2P08235 984 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ENTPD4Q9Y227 616 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCNA2P20248 432 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 DSG4Q86SJ6 1040 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 SLC9A7Q96T83 725 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 UGT2B28Q9BY64 529 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCDC177Q9NQR7 707 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCDC182A6NF36 153 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ATG7O95352 703 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CAMKK1Q8N5S9 505 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 C9orf16Q9BUW7 83 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 WDCPQ9H6R7 721 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 NR2C2P49116 596 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 TAF6P49848 677 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 ARHGAP28Q9P2N2 729 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 EPHB3P54753 998 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 HEATR4Q86WZ0 1026 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms