RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 KYAT3Q6YP21 454 aaKnown RBP9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 CCNJLQ8IV13 435 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 NUDCD3Q8IVD9 361 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 ARHGAP24Q8N264 748 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 STKLD1Q8NE28 680 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 ARMC2Q8NEN0 867 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 NLRP7Q8WX94 980 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 PRR11Q96HE9 360 aaPredicted RBP9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 ZMAT2Q96NC0 199 aaKnown RBP9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 OLFM3Q96PB7 478 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 CSPG4P5Q96PW8 444 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 SIKE1Q9BRV8 207 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 DNAI2Q9GZS0 605 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 WWP1Q9H0M0 922 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 ADAMTS10Q9H324 1103 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 DHX35Q9H5Z1 703 aaKnown RBP9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 UGT1A7Q9HAW7 530 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 UGT1A10Q9HAW8 530 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 UGT1A8Q9HAW9 530 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 TAS2R1Q9NYW7 299 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 MORF4L1Q9UBU8 362 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 AP4E1Q9UPM8 1137 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
IGHV3-54-201ENST00000622166 SF3B1O75533 1304 aaKnown RBP eCLIP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 A0A0A0MRY4 1105 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FAM237BA0A1B0GVD1 139 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 RRN3P2A6NIE6 340 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 A8MXQ7 604 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 H3BRB1 525 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 PIRO00625 290 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FAM163BP0C2L3 166 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 ACADSP16219 412 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 HOXA11P31270 313 aaPredicted RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 TMPRSS15P98073 1019 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 STX3Q13277 289 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 BMPR2Q13873 1038 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 CHI3L2Q15782 390 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SOWAHAQ2M3V2 549 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 EFHC1Q5JVL4 640 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 GJC2Q5T442 439 aaPredicted RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SYCP2LQ5T4T6 812 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 C9orf57Q5W0N0 161 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 CES4AQ5XG92 561 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 LRRC8BQ6P9F7 803 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SLC27A1Q6PCB7 646 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 TRMT10BQ6PF06 316 aaKnown RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 BNIPLQ7Z465 357 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 CRLF3Q8IUI8 442 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 NDUFAF2Q8N183 169 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 MPP5Q8N3R9 675 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SMC1BQ8NDV3 1235 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 TFB1MQ8WVM0 346 aaKnown RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 HTR3CQ8WXA8 447 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 CDCA5Q96FF9 252 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SPATA13Q96N96 652 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 PPP1R16BQ96T49 567 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 B3GNT5Q9BYG0 378 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 STN1Q9H668 368 aaKnown RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 TUT1Q9H6E5 874 aaKnown RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FBXO6Q9NRD1 293 aaPredicted RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FAM49BQ9NUQ9 324 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 GDAP2Q9NXN4 497 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SNTG2Q9NY99 539 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 DTLQ9NZJ0 730 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 STOML1Q9UBI4 398 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 CORO1CQ9ULV4 474 aaPredicted RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 FZD10Q9ULW2 581 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 UBQLN1Q9UMX0 589 aaKnown RBP9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 SORCS3Q9UPU3 1222 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 ZNF236Q9UL36 1845 aa9.93□□□□□ -0.82
IGHV3-54-201ENST00000622166 KAT6AQ92794 2004 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 A6NHS1 94 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 SDR42E2A6NKP2 422 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 PPP1R12AO14974 1030 aaPredicted RBP9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 GLRA3O75311 464 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 ENTPD5O75356 428 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 DAB1O75553 588 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 SMNDC1O75940 238 aaKnown RBP eCLIP9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 PSMG1O95456 288 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 CD4P01730 458 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 ZNF286BP0CG31 522 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 VAV1P15498 845 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 AMPD1P23109 780 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 AXLP30530 894 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 VHLP40337 213 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 ABL2P42684 1182 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 PTDSS1P48651 473 aaKnown RBP9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 GLUD2P49448 558 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 CCNA1P78396 465 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 FRG1Q14331 258 aaKnown RBP9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 INSCQ1MX18 579 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 TSNAXIP1Q2TAA8 658 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 KHDC1Q4VXA5 237 aaKnown RBP9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 XKR4Q5GH76 650 aa9.92□□□□□ -0.82
IGHV3-54-201ENST00000622166 PPP6R3Q5H9R7 873 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms