RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NAXDQ8IW45 347 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 PHTF2Q8N3S3 785 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 GLIS3Q8NEA6 775 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 ANKRD20A12PQ8NF67 263 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 ADAMTS14Q8WXS8 1223 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 PCED1BQ96HM7 432 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 LRIG1Q96JA1 1093 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TNIP3Q96KP6 325 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 MMS19Q96T76 1030 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 ELOVL4Q9GZR5 314 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 DNAI2Q9GZS0 605 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 XYLT2Q9H1B5 865 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 SLC6A17Q9H1V8 727 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 SNX25Q9H3E2 840 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 TBC1D14Q9P2M4 693 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 HELZ2Q9BYK8 2649 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 HELZP42694 1942 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 SMG1Q96Q15 3661 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 A0A0A0MRY4 1105 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 PES1O00541 588 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 TULP3O75386 442 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 OLFM2O95897 454 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 OAS1P00973 400 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 C4BPAP04003 597 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 DLATP10515 647 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 IRF1P10914 325 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 NDUFV2P19404 249 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 TRIM21P19474 475 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 MAOBP27338 520 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 NTSR1P30989 418 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 CACNA2D1P54289 1103 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 STK4Q13043 487 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 SNX30Q5VWJ9 437 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 KIAA1324Q6UXG2 1013 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 SLCO6A1Q86UG4 719 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 UNC93AQ86WB7 457 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 DDX42Q86XP3 938 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPC6-202ENST00000617456 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 MARCH9Q86YJ5 346 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 BBS7Q8IWZ6 715 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 ETFBKMTQ8IXQ9 262 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 OR6B3Q8NGW1 331 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 SETD7Q8WTS6 366 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 HPS3Q969F9 1004 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 FBXO32Q969P5 355 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 BBC3Q96PG8 261 aaPredicted RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 SLITRK1Q96PX8 696 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 ACOX2Q99424 681 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 KCTD10Q9H3F6 313 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 SLC39A2Q9NP94 309 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 CD93Q9NPY3 652 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 EXOC1Q9NV70 894 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 DEC1Q9P2X7 70 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 APOBEC2Q9Y235 224 aaKnown RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
GPC6-202ENST00000617456 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 PCDH15Q96QU1 1955 aa9.01□□□□□ -0.97
GPC6-202ENST00000617456 CEP192Q8TEP8 1941 aa9□□□□□ -0.97
GPC6-202ENST00000617456 A0A1W2PQF6 199 aa9□□□□□ -0.97
GPC6-202ENST00000617456 E2F8A0AVK6 867 aa9□□□□□ -0.97
GPC6-202ENST00000617456 FAM92AA1XBS5 289 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CLDN5O00501 218 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CLIC2O15247 247 aa9□□□□□ -0.97
GPC6-202ENST00000617456 HOXC11O43248 304 aaPredicted RBP9□□□□□ -0.97
GPC6-202ENST00000617456 COCHO43405 550 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CALUO43852 315 aaPredicted RBP9□□□□□ -0.97
GPC6-202ENST00000617456 ZNF217O75362 1048 aa9□□□□□ -0.97
GPC6-202ENST00000617456 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
GPC6-202ENST00000617456 GNSP15586 552 aa9□□□□□ -0.97
GPC6-202ENST00000617456 PFKFB1P16118 471 aa9□□□□□ -0.97
GPC6-202ENST00000617456 PTPN1P18031 435 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 RPL13P26373 211 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 YWHAQP27348 245 aa9□□□□□ -0.97
GPC6-202ENST00000617456 SYKP43405 635 aa9□□□□□ -0.97
GPC6-202ENST00000617456 AFMP43652 599 aa9□□□□□ -0.97
GPC6-202ENST00000617456 TUBP50607 506 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CYP2J2P51589 502 aa9□□□□□ -0.97
GPC6-202ENST00000617456 NAP1L1P55209 391 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 GRIK2Q13002 908 aa9□□□□□ -0.97
GPC6-202ENST00000617456 SLC14A1Q13336 389 aa9□□□□□ -0.97
GPC6-202ENST00000617456 ZACNQ401N2 412 aa9□□□□□ -0.97
GPC6-202ENST00000617456 PREPLQ4J6C6 727 aaPredicted RBP9□□□□□ -0.97
GPC6-202ENST00000617456 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
GPC6-202ENST00000617456 SYCP2LQ5T4T6 812 aa9□□□□□ -0.97
GPC6-202ENST00000617456 AP1ARQ63HQ0 302 aa9□□□□□ -0.97
GPC6-202ENST00000617456 GRAMD4Q6IC98 578 aa9□□□□□ -0.97
GPC6-202ENST00000617456 SDE2Q6IQ49 451 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms