RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 TBX3O15119 743 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 RAD51BO15315 384 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SEC22BO75396 215 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 BMP10O95393 424 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 MSH3P20585 1137 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TAF6P49848 677 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CDC42EP1Q00587 391 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 GJB7Q6PEY0 223 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ARMC8Q8IUR7 673 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TRAPPC9Q96Q05 1148 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 MNTQ99583 582 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 RHBGQ9H310 441 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NEUROD4Q9HD90 331 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 AAR2Q9Y312 384 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 PNMA8CA0A1B0GUJ8 204 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 KRT33AO76009 404 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PPIDQ08752 370 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 PDIA6Q15084 440 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PAN2Q504Q3 1202 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 OR6Y1Q8NGX8 325 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PHF21BQ96EK2 531 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 NSMCE2Q96MF7 247 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ZSWIM1Q9BR11 485 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 MTA3Q9BTC8 594 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 EXO5Q9H790 373 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ZMYM5Q9UJ78 669 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 FBXO10Q9UK96 956 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 WBP11Q9Y2W2 641 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 ACOT9Q9Y305 439 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ARHGAP31Q2M1Z3 1444 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ERVV-1B6SEH8 477 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PSMD14O00487 310 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 KHDRBS3O75525 346 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 CRTAMO95727 393 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 TMEM253P0C7T8 217 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 SRGNP10124 158 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 DCTN2Q13561 401 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 MZT2BQ6NZ67 158 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PACS1Q6VY07 963 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ARMCX6Q7L4S7 300 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 BRSK2Q8IWQ3 736 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 NUAK2Q9H093 628 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 AFF2P51816 1311 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ZBTB7AO95365 584 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 IDH2P48735 452 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 ITIH4Q14624 930 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ZNF846Q147U1 533 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 CLIP3Q96DZ5 547 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 GRIP2Q9C0E4 1043 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 TMEM8AQ9HCN3 771 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 TCF7L2Q9NQB0 619 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ENOPH1Q9UHY7 261 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 TPRKBQ9Y3C4 175 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 PLXNC1O60486 1568 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 STXBP1P61764 594 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 BAATQ14032 418 aaPredicted RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 TCEA2Q15560 299 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 NOL9Q5SY16 702 aaKnown RBP6.15□□□□□ -1.42
RFX3-212ENST00000617270 OLFML1Q6UWY5 402 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 THAP2Q9H0W7 228 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 ARHGAP28Q9P2N2 729 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 MYRFQ9Y2G1 1151 aa6.15□□□□□ -1.42
RFX3-212ENST00000617270 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.43
RFX3-212ENST00000617270 CKBP12277 381 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 GSTM5P46439 218 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 GPR15P49685 360 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 COPZ1P61923 177 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 POU5F1Q01860 360 aaKnown RBP6.15□□□□□ -1.43
RFX3-212ENST00000617270 PRKAA1Q13131 559 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 EFCAB12Q6NXP0 572 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 ATG14Q6ZNE5 492 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 FAM126BQ8IXS8 530 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 ZSWIM2Q8NEG5 633 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 DNAJC1Q96KC8 554 aaKnown RBP6.15□□□□□ -1.43
RFX3-212ENST00000617270 CNPY3Q9BT09 278 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 CHID1Q9BWS9 393 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 FRMD8Q9BZ67 464 aaPredicted RBP6.15□□□□□ -1.43
RFX3-212ENST00000617270 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 AHSPQ9NZD4 102 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 MAFFQ9ULX9 164 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 SSU72P8A0A1W2PR75 194 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 CCDC154A6NI56 674 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 STX16-NPEPL1H3BU86 382 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 STX16O14662 325 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 LIN7AO14910 233 aaPredicted RBP6.15□□□□□ -1.43
RFX3-212ENST00000617270 ZC3H11AO75152 810 aaKnown RBP eCLIP6.15□□□□□ -1.43
RFX3-212ENST00000617270 LDLRP01130 860 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 NRG3P56975 720 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 BOLA3Q53S33 107 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 PYDC2Q56P42 97 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 C4orf22Q6V702 233 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 CLEC10AQ8IUN9 316 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 CCDC185Q8N715 623 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 TMEM159Q96B96 161 aa6.15□□□□□ -1.43
RFX3-212ENST00000617270 AHCYL2Q96HN2 611 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms